Gallbladder Cancer (MSK, Cancer 2018): Targeted Sequencing of 103 samples with matched normals from 101 Gallbladder cancer patients.
UID: 10454
Publisher(s): Memorial Sloan Kettering Cancer Center- Description
- This dataset contains summary data visualizations and clinical data from a sampling of gallbladder tumors. The clinical data includes deidentified patient and sample IDs, mutation count, the fraction of genome that was altered, patient demographics, sample site, MSK IMPACT gene panel, Center of sequencing, Collaboration Id, Gallbladder Stone , Gene Panel, Metastatic Site, Oncotree Code, Primary Tumor Site, Sample Collection Method, Sample coverage, Somatic Status, Specimen Preservation Type, and Stage. The data set also includes copy-number segment data downloadable as .seg files and viewable via the Integrative Genomics Viewer.
Gallbladder Cancer
- Access Restrictions
-
Free to All
- Access Instructions
- This cBioPortal for Cancer Genomics dataset is publicly available for viewing in tables or, for copy-number segments, via integrated IGV application. The data is also available for download in its entirety as a tarball or as individual TSV (tab separated value) or SEG files. Some features are only available by logging in with a Google or Microsoft account. These features include storing your virtual studies and groups which allows you to access your studies and groups from any computer, and to allow cBioPortal to remember your study view charts preferences for each study (i.e. order of the charts, type of charts and visibility). Login is optional and not required to access any of the other features of cBioPortal. Downloaded SEG files (tab-delimited segmented data text files that list loci and associated numeric values) can be viewed by downloading and installing the Integrative Genomics Viewer desktop application.
- Associated Publications
- Data Type
- Software Used
- Dataset Format(s)
- TSV, TAR, SEG
- Data Tool(s)
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MSK-IMPACT
- Dataset Size
- 169 KB
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