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Germ Cell Tumors and Shared Leukemias: Targeted and WES sequencing of germ cell tumor and shared leukemia samples

UID: 10558

Publisher(s): Memorial Sloan Kettering Cancer Center

Description
This dataset contains the summary data visualizations and clinical data of 21 samples from 11 patients of targeted and WES sequencing of germ cell tumor and shared leukemia samples. Clinical data includes: Cancer Type, Number of Samples per Patient, Mutation Count, Fraction Genome Altered, Specimen Preservation Type, Platform and Somatic Status. The plaintext components of the dataset can be downloaded as a tar file. The clinical data can be downloaded as a tsv file. The dataset includes copy-number segment data downloadable as .seg files and viewable via the Integrative Genomics Viewer.
Subject of Study
Subject(s)
OncoTree Cancer Type(s)
Acute Myeloid Leukemia
Chronic Myelomonocytic Leukemia
Histiocytic Sarcoma
Lymphoid Neoplasm
Myelodysplastic Syndromes
Mature T and NK Neoplasms
Non-Seminomatous Germ Cell Tumor
Access Restrictions
Free to All
Access Instructions
This cBioPortal for Cancer Genomics dataset is publicly available for viewing in tables or, for copy-number segments, via integrated IGV application. The data is also available for download in its entirety as a tarball or as individual TSV (tab separated value) or SEG files. Some features are only available by logging in with a Google or Microsoft account. These features include storing your virtual studies and groups which allows you to access your studies and groups from any computer, and to allow cBioPortal to remember your study view charts preferences for each study (i.e. order of the charts, type of charts and visibility). Login is optional and not required to access any of the other features of cBioPortal.
Data Type
Software Used
Integrative Genomics Viewer (IGV)
Dataset Format(s)
TSV, TAR, SEG
Data Tool(s)
MSK-IMPACT
WES
MSK-IMPACT Heme
Dataset Size
71 KB (TAR), 3.4 KB (TSV), 83.4 KB (SEG)
Data Catalog Record Updated
2021-06-15