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Melanoma (MSKCC, 2018): MSK-IMPACT sequencing of 720 Melanoma tumor samples with matched normals.

UID: 10566

Publisher(s): Memorial Sloan Kettering Cancer Center

Description
This dataset contains the summary data visualizations and clinical data of 696 samples of MSK-IMPACT sequencing of Melanoma tumors with matched normals from 696 patients. Clinical data includes: Cancer Type, Mutation Count, Fraction Genome Altered, Primary/Metastasis Sample Type, Demographic Information, AJCC 7th & AJCC 8th Staging, Bone Status, CNS Status, DMT Primary Site, Driver Class, ECOG, LDH, LDH Abnl, LDH Ratio, Liver Mets. The clinical data can be downloaded as a tsv file. The dataset includes copy-number segment data downloadable as .seg files and viewable via the Integrative Genomics Viewer.
Subject of Study
Subject(s)
OncoTree Cancer Type(s)
Melanoma of Unknown Primary
Cutaneous Melanoma
Access Restrictions
Free to All
Access Instructions
This cBioPortal for Cancer Genomics dataset is publicly available for viewing in tables or, for copy-number segments, via integrated IGV application. The data is also available for download in its entirety as a tarball or as individual TSV (tab separated value) or SEG files. Some features are only available by logging in with a Google or Microsoft account. These features include storing your virtual studies and groups which allows you to access your studies and groups from any computer, and to allow cBioPortal to remember your study view charts preferences for each study (i.e. order of the charts, type of charts and visibility). Login is optional and not required to access any of the other features of cBioPortal.
Data Type
Software Used
Integrative Genomics Viewer (IGV)
Dataset Format(s)
TSV, SEG
Data Tool(s)
MSK-IMPACT
Dataset Size
161 KB (TSV), 1.7MB (SEG)
Data Catalog Record Updated
2021-10-14