Desmoplastic Melanoma (Broad Institute, Nat Genet 2015): Exome/Whole Genome sequencing of 20 desmoplastic melanoma tumor/normal pairs

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UID: 10571

Publisher(s): Broad Institute

Description: This dataset contains the summary data visualizations and clinical data of Exome/Whole Genome sequencing of 20 desmoplastic melanoma tumor/normal pairs. Clinical data includes: Mutation Count, Diagnosis Age, Anatomic Region, Detailed Sample Histology Category, Platform, Secondary Platform, Total Mutations, and Tumor Other Histologic Subtype. The plaintext components of the dataset can be downloaded as a tar file. The clinical data can be downloaded as a .tsv file.

Subject of Study

Subject(s)

OncoTree Cancer Type(s)

Desmoplastic Melanoma
Melanoma

Access via cBioPortal
Access Restrictions: Free to All
Access Instructions: This cBioPortal for Cancer Genomics dataset is publicly available for viewing in tables. The data is available for download in its entirety as a tarball or as individual TSV (tab separated value). Some features are only available by logging in with a Google or Microsoft account. These features include storing your virtual studies and groups which allows you to access your studies and groups from any computer, and to allow cBioPortal to remember your study view charts preferences for each study (i.e. order of the charts, type of charts and visibility). Login is optional and not required to access any of the other features of cBioPortal.
Associated Publications: Shain A, Garrido M, Botton T, Tet al. Exome sequencing of desmoplastic melanoma identifies recurrent NFKBIE promoter mutations and diverse activating mutations in the MAPK pathway. Nature Genetics. 2015; 47(10):1194-1199.
Data Type: Genomic
Dataset Format(s): TSV, TAR
Dataset Size: 11MB (TAR), 3.8KB (TSV)

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