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Myelodysplastic (MSKCC, 2020): Single-cell genomics reveals the genetic and molecular bases for escape from mutational epistasis in myeloid neoplasms

UID: 10575

Publisher(s): Memorial Sloan Kettering Cancer Center

Description
This dataset contains the summary data visualizations and clinical data from 4,231 myeloid neoplasm samples from 4,231 patients. Clinical data includes: Cancer Type, Cancer Type Detailed, Mutation Count, Oncotree Code, Sequencing Type, Somatic Status, Study. The plaintext components of the dataset can be downloaded as a tar file. The clinical data can be downloaded as a tsv file.
Local Expert
Subject of Study
Subject(s)
OncoTree Cancer Type(s)
Atypical Chronic Myeloid Leukemia, BCR-ABL1-
Acute Leukemias of Ambiguous Lineage
AML with Maturation
Acute Megakaryoblastic Leukemia
Acute Myeloid Leukemia
AML with inv(16)(p13.1q22) or t(16;16)(p13.1;q22);CBFB-MYH11
AML with Biallelic Mutations of CEBPA
AML with t(6;9)(p23;q34.1);DEK-NUP214
AML with inv(3)(q21.3q26.2) or t(3;3)(q21.3;q26.2); GATA2, MECOM
AML with Minimal Differentiation
AML with t(9;11)(p21.3;q23.3);MLLT3-KMT2A
AML with Myelodysplasia-Related Changes
AML, NOS
AML with Mutated NPM1
AML with Mutated RUNX1
AML with t(8;21)(q22;q22.1);RUNX1-RUNX1T1
Acute Myelomonocytic Leukemia
Acute Monoblastic/Monocytic Leukemia
APL with PML-RARA
Acute Undifferentiated Leukemia
AML without Maturation
Blastic Plasmacytoid Dendritic Cell Neoplasm
Chronic Myelogenous Leukemia
Chronic Myeloid Leukemia, BCR-ABL1+
Chronic Myelomonocytic Leukemia
Essential Thrombocythemia
Essential Thrombocythemia Myelofibrosis
Mastocytosis
Myelodysplastic Syndromes
Myelodysplastic/Myeloproliferative Neoplasms
MDS with Excess Blasts
MDS with excess blasts-1
MDS with excess blasts-2
MDS with Isolated Del(5q)
MDS with Multilineage Dysplasia
MDS/MPN with Ring Sideroblasts and Thrombocytosis
MDS with Ring Sideroblasts
MDS with Ring Sideroblasts and Multilineage Dysplasia
MDS with Ring Sideroblasts and Single Lineage Dysplasia
MDS with Single Lineage Dysplasia
MDS, Unclassifiable
Myeloid Leukemia Associated with Down Syndrome
Mixed Phenotype Acute Leukemia, B/Myeloid, NOS
Mixed Phenotype Acute Leukemia, T/Myeloid, NOS
Myeloproliferative Neoplasms
Myeloid Sarcoma
Pure Erythroid Leukemia
Primary Myelofibrosis
Primary Myelofibrosis,Overt Fibrotic Stage
Polycythemia Vera
Polycythaemia Vera Myelofibrosis
Therapy-Related Myelodysplastic Syndrome
Therapy-Related Myeloid Neoplasms
Access Restrictions
Free to All
Access Instructions
This cBioPortal for Cancer Genomics dataset is publicly available for viewing in tables. The data is available for download in its entirety as a tarball or as individual TSV (tab separated value) files. Some features are only available by logging in with a Google or Microsoft account. These features include storing your virtual studies and groups which allows you to access your studies and groups from any computer, and to allow cBioPortal to remember your study view charts preferences for each study (i.e. order of the charts, type of charts and visibility). Login is optional and not required to access any of the other features of cBioPortal.
Associated Publications
Data Type
Software Used
OncoTree
Dataset Format(s)
TSV, TAR
Dataset Size
26.4 MB (TAR), 604 KB (TSV)
Data Catalog Record Updated
2021-10-14