Metaplastic Breast Cancer (MSK, 2021): Targeted or whole-exome sequencing of 19 Metaplastic Breast Cancer tumor/normal pairs

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UID: 10636

Publisher(s): Memorial Sloan Kettering Cancer Center

Description: This dataset contains the summary data visualizations and clinical data from target and whole-exome sequencing of 19 tumor/normal Metaplastic Breast Cancer samples from 19 patients. Clinical data includes: Mutation Count, ER Status, Gene Panel, HER2 Status, Neoplasm Histologic Grade, PR Status, Tumor Size (cm). The plaintext components of the dataset can be downloaded as a tar file. The clinical data can be downloaded as a tsv file.

Subject of Study

Subject(s)

OncoTree Cancer Type(s)

Breast
Metaplastic Breast Cancer

Access via cBioPortal
Access Restrictions: Free to All
Access Instructions: This cBioPortal for Cancer Genomics dataset is publicly available for viewing in tables. The data is available for download in its entirety as a tarball or as individual TSV (tab separated value) files. Some features are only available by logging in with a Google or Microsoft account. These features include storing your virtual studies and groups which allows you to access your studies and groups from any computer, and to allow cBioPortal to remember your study view charts preferences for each study (i.e. order of the charts, type of charts and visibility). Login is optional and not required to access any of the other features of cBioPortal.
Associated Publications: da Silva E, Selenica P, Vahdatinia M, et al. TERT promoter hotspot mutations and gene amplification in metaplastic breast cancer. npj Breast Cancer. 2021; 7:43.
Data Type: Genomic
Dataset Format(s): TSV, TAR
Data Tool(s): MSK-IMPACT

WXS
Dataset Size: 55 KB (TAR), 3KB (TSV)

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