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Gene expression from normal and Msi2 KO mouse LSK cells

UID: 10831

Author(s): Kharas, Michael G.* * MSK affiliated

Description
Summary from the GEO: "Hematopoietic stem and progenitor cells (Lineagelo ScaI+ c-Kit+) were sorted 4 weeks post pIpC injection. RNA was extracted using TRIZOL and RNEASY RNA extraction kit. RNA was then amplified using NUGEN Pico amplification kit, fragmented and hybridized on Mouse Expression Array 430 2.0. Signal normalization was performed by RMA method. Data were analyzed using GSEA across the complete list of genes ranked by signal-to-noise ratio.
Samples came from bone marrow of 4 normal mice and 4 mice with conditional Msi2 knockout."
Subject of Study
Subject(s)
Access via GEO

TAR and CEL Sequencing Data
Accession #: GSE53385

Access via BioProject

Additional information about overall initiative.
Accession #: PRJNA232066

Access Restrictions
Free to All
Access Instructions
The NCBI Gene Expression Omnibus, SRA, and BioProject databases provide open access to these files.
Associated Publications
Data Type
Equipment Used
Affymetrix Mouse Genome 430 2.0 Array
Software Used
GEO2R
Dataset Format(s)
TAR, CEL, RAW
Dataset Size
27.2 Mb (TAR of CEL)
Data Catalog Record Updated
2021-08-11