ATAC-Seq of MSK-PCa series of Patient Derived Organoids and Xenografts, and prostate cell lines
UID: 10962
- Description
- Summary from GEO:
"Chromatin accessibility profiling analsis was performed in 22 human prostate cancer organoid, 6 Xenografts and 7 cell lines."
Overall design from GEO:
"ATAC-Seq of MSK-PCa series of Patient Derived Organoids and Xenografts, and prostate cell lines
Please note that the processed data includes 5 samples (MSKEF1/PARCB1/PARCB3/PARCB6/PARCB8) from another study GSE118207:
GSM3320999: prostate: MSKCC-EF1 ATAC-seq
GSM3320990: prostate: PARCB1 ATAC-seq
GSM3320991: prostate: PARCB3 ATAC-seq
GSM3320992: prostate: PARCB6 ATAC-seq
GSM3320993: prostate: PARCB8 ATAC-seq
and the consensus peak set was generated using those samples."
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Access via GEO
Accession #: GSE193917Access via BioProject
Accession #: PRJNA798395 - Access Restrictions
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Free to All
- Access Instructions
- The NCBI Gene Expression Omnibus and BioProject databases provide open access to these files.
- Associated Publications
- Equipment Used
- Dataset Format(s)
- CSV
- Dataset Size
- 88.9 MB
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