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ATAC-Seq of MSK-PCa series of Patient Derived Organoids and Xenografts, and prostate cell lines

UID: 10962

Author(s): Khurana, Ekta, Chen, Yu* * MSK affiliated

Description
Summary from GEO:

"Chromatin accessibility profiling analsis was performed in 22 human prostate cancer organoid, 6 Xenografts and 7 cell lines."

Overall design from GEO:

"ATAC-Seq of MSK-PCa series of Patient Derived Organoids and Xenografts, and prostate cell lines

Please note that the processed data includes 5 samples (MSKEF1/PARCB1/PARCB3/PARCB6/PARCB8) from another study GSE118207:
GSM3320999: prostate: MSKCC-EF1 ATAC-seq
GSM3320990: prostate: PARCB1 ATAC-seq
GSM3320991: prostate: PARCB3 ATAC-seq
GSM3320992: prostate: PARCB6 ATAC-seq
GSM3320993: prostate: PARCB8 ATAC-seq
and the consensus peak set was generated using those samples."
Subject of Study
Subject(s)
Data Catalog Record Updated
2023-10-20