Nucleosome Positioning Dynamics Through the Yeast Metabolic Cycle

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UID: 11242

Author(s): Nocetti, Nicolas, Whitehouse, Iestyn* * MSK affiliated

Description: Summary from GEO:

"We present Micrococcal Nuclease digestion maps of S. cerevisiae through the progression of the Yeast Metabolic Cycle. We demonstrate that nucleosome positions at many promoters are dynamic, and remodeling events at promoters have significant consequences with respect to gene expression."

Overall design from GEO:

"Examination of nucleosome positions and transcriptional output through metabolic oscillations in budding yeast."

Subject of Study

Subject(s)

Access via GEO

Accession #: GSE77631

Access via BioProject

Accession #: PRJNA311054

Access via SRA

Accession #: SRP069352
Access Restrictions: Free to All
Access Instructions: The NCBI Gene Expression Omnibus, BioProject, and SRA databases provide open access to these files.
Associated Publications: Nocetti N, Whitehouse I. Nucleosome repositioning underlies dynamic gene expression. Genes and Development. 2016; 30(6):660-672.
Equipment Used: Illumina HiSeq 2000
High throughput gene sequencing system
Dataset Format(s): Microsoft Excel, TAR, WIG
Dataset Size: 76.4 MB

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