Medulloblastoma (Broad, Nature 2012)

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UID: 11253

Publisher(s): Broad Institute

Description: Whole exome sequencing of 92 primary medulloblastoma tumor/normal pairs. The clinical data includes mutation count, information about mutated genes, mutation counts, TMB, and genomic profiles . The data set also includes charts visualizing data summaries and a customizable plotting tool.

Subject of Study

Subject(s)

OncoTree Cancer Type(s)

Medulloblastoma

Access via cBioPortal
Access Restrictions: Free to All
Access Instructions: This cBioPortal for Cancer Genomics dataset is publicly available for viewing in tables or, for copy-number segments, via integrated IGV application. The data is also available for download in its entirety as a zipped TSV file. Some features are only available by logging in with a Google or Microsoft account. These features include storing your virtual studies and groups which allows you to access your studies and groups from any computer, and to allow cBioPortal to remember your study view charts preferences for each study (i.e. order of the charts, type of charts and visibility). Login is optional and not required to access any of the other features of cBioPortal.
Associated Publications: Pugh TJ, Weeraratne SD, Archer TC, et al. Medulloblastoma exome sequencing uncovers subtype-specific somatic mutations. Nature. 2012 Aug 2;488(7409):106-10. PMID: 22820256; PMCID: PMC3413789.
Dataset Format(s): TSV
Dataset Size: 8.8 KB

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