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Pointy code repository

UID: 11321

Author(s): Wan, Jonathan C. M.*, Stephens, Dennis*, Luo, Lingqi*, White, James R., Stewart, Caitlin M.*, Rousseau, Benoît*, Tsui, Wai Yi*, Diaz, Luis A.* * MSK affiliated

Description
Code used in the Pointy pipeline from Wan et al. Used to extract point mutations from low-coverage plasma WGS. Available for academic research purposes only
Subject(s)
Algorithms
Plasma
Software
Whole Genome Sequencing
Access via Zenodo

Access Restrictions
Author approval required
Access Instructions
The record is publicly accessible, but files are restricted to users with access. Users are required to agree to the license terms and conditions prior to approval. Researchers aim to respond to requests for access within 5 working days.
DOI
10.5281/zenodo.6666951
Associated Publications
Wan J, Stephens D, Luo L, White J, Stewart C, Rousseau B, Tsui D, Diaz L. Genome-wide mutational signatures in low-coverage whole genome sequencing of cell-free DNA. Nature Communications. 2022; 13:4953.
Dataset Size
4.7 GB
Data Catalog Record Updated
2024-08-06