Multi-region sequencing of tumor samples from PDAC patients

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UID: 11467

Publisher(s): European Genome-phenome Archive

Description: Description from EGA:

"This study includes 542 of multi-region sampled whole exome sequencing data from 83 pancreatic cancer patients in 6 individual experiments : Kras wildtype, local recurrence, treatment-naive (MetomeV2), radiotherapy plus chemotherapy (Radome), chemotherapy-only group (Treatome) and Proj_B-100-478."

Dataset is also accessioned as a study, associated with publication "The Evolutionary Forest of Pancreatic Cancer" (Mullen, et. al.), under accession number EGAS00001007379. The study can be accessed through the dataset page on EGA.

Subject of Study

Subject(s)

OncoTree Cancer Type(s)

Pancreas

Access via EGA

Accession #: EGAD00001011109
Access Restrictions: Author approval required
Access Instructions: Accessible under the MSKCC Medical Donation Program Data Access Policy. Read more on the EGA website.
Associated Publications: Mullen K, Hong J, Attiyeh M, Hayashi A, Sakamoto H, Kohutek Z, McIntyre C, Zhang H, Makohon-Moore A, Zucker A, Wood L, Myers M, Arnold B, Zaccaria S, Chou J, Capanu M, Socci N, Raphael B, Iacobuzio-Donahue C. The evolutionary forest of pancreatic cancer. Cancer Discovery. 2025; 15(2):329-345.
Equipment Used: Illumina HiSeq 2500
High throughput sequencing system
Dataset Format(s): BAM
Dataset Size: 11.6 TB

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