Kim_ATAC_code

UID: 11497

Author(s): Truong, Buu

Description
Description from GitHub:

"Source codes used for the primary analysis:

annotToLD_thinannot.py: make .ldscore.gz from .annot files

PartitionHeritability_baseline_others.py: run S-LDSC partition heritability given .annot and .ldscore.gz files (conditioning on the baseline model and other annotation(s))

PartitionHeritability_run.sh: run PartitionHeritability_baseline_others.py across multiple summary statistics

File formats:

.annot: thin-annot version is used (one column ANNOT)

.ldscore.gz: CHR, SNP, BP, L2 (delimiter = '\t')

For other details including creating annotations, please read the manuscript."
Subject of Study
Subject(s)
Data Catalog Record Updated
2025-10-13