Kim_ATAC_code
UID: 11497
- Description
- Description from GitHub:
"Source codes used for the primary analysis:
annotToLD_thinannot.py: make .ldscore.gz from .annot files
PartitionHeritability_baseline_others.py: run S-LDSC partition heritability given .annot and .ldscore.gz files (conditioning on the baseline model and other annotation(s))
PartitionHeritability_run.sh: run PartitionHeritability_baseline_others.py across multiple summary statistics
File formats:
.annot: thin-annot version is used (one column ANNOT)
.ldscore.gz: CHR, SNP, BP, L2 (delimiter = '\t')
For other details including creating annotations, please read the manuscript."
- Access Restrictions
-
Free to All
- Access Instructions
- Free to download via GitHub
- Associated Publications
- Dataset Format(s)
- PY, MD, SH
- Dataset Size
- 3,000 B
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