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Tumors with TRK fusions (MSK, 2019): Tumors with TRK fusions based on MSK-IMPACT targeted sequencing.
- Description
This dataset contains summary data visualizations and clinical data from a broad sampling of tropomyosin receptor kinase (TRK) fusion tumors. The data was gathered utilizing the MSK-IMPACT targeted sequencing test. The clinical data includes tumor type (based on the opensource OncoTree ontology developed at MSK), information about mutated genes, patient demographics, and modality. The data set also...
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DNA Mutational AnalysisOncogene Proteins, FusionReceptor Protein-Tyrosine KinasesReceptor, trkAReceptor, trkBReceptor, trkC
- Access Rights
- Free to All
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Thyroid Carcinoma
- Description
TCGA Thyroid Carcinoma. Source data from GDAC Firehose. Previously known as TCGA Provisional. This dataset contains summary data visualizations and clinical data from a broad sampling of 516 carcinomas from 508 patients. The data was gathered as part of the Broad Institute of MIT and Harvard Firehose initiative, a cancer analysis pipeline. The clinical data includes mutation count, information about...
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Carcinoma, PapillaryCarcinoma, Papillary, FollicularDNA Mutational AnalysisThyroid Cancer, PapillaryThyroid Neoplasms
- Access Rights
- Free to All
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Poorly-Differentiated and Anaplastic Thyroid Cancers: Targeted sequencing of 341 cancer genes from 117 patient-derived PDTCs and ATCs
- Description
This dataset contains the summary data visualizations and clinical data of Poorly-Differentiated and Anaplastic Thyroid Cancers with targeted sequencing of 341 cancer genes from 117 patient-derived PDTCs and ATCs. Clinical data includes: Mutation Count, Fraction Genome Altered, Diagnosis Age, Overall Survival Status, Metastasis/Primary Sample type, Patient Sex, AJCC Tumor Stage Code, Cytological Phenotype,...
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DNA Mutational AnalysisThyroid Cancer, PapillaryThyroid Carcinoma, AnaplasticThyroid Neoplasms
- Access Rights
- Free to All
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Genomic and Transcriptomic Hallmarks of Poorly-Differentiated and Anaplastic Thyroid Cancers
- Authors
- Landa-Lopez, IngioIbrahimpasic, TihanaBoucai, LauraSinha, Rileen13 more author(s)...
- Description
Summary from the GEO: "BACKGROUND. Poorly-differentiated (PDTC) and anaplastic (ATC) thyroid cancers are rare and frequently lethal tumors, which so far have not been subjected to comprehensive genetic characterization. METHODS. We performed next generation sequencing of 341 cancer genes in 117 PDTCs and ATCs, and a transcriptomic analysis of a representative subset of 37 tumors. Results were analyzed...
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Thyroid Cancer, PapillaryThyroid Carcinoma, AnaplasticThyroid Neoplasms
- Access Rights
- Free to All