fragCounter

Authors

Imielinski, Marcin

Description

Description from GitHub: "The goal of fragCounter is to correct Whole genome or targeted sequencing data for GC and mappability bias. The GC bias curve is determined by loess regression of read count by GC and mappability scores. Segmentation is done by circular binary segmentation (CBS) algorithm after getting tumor/normal ratios of corrected read counts."

Subject

Algorithms

Base Composition

Genomics

Whole Genome Sequencing

Access Rights

Free to All