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  • A chemical strategy for protease substrate profiling

    Authors
    Griswold, Andrew
    Bachovchin, Daniel
    Description

    Here, we introduce a simple method, termed CHOPS, for the discovery of protease substrates. CHOPS exploits a 2-pyridinecarboxaldehyde (2PCA)-biotin probe, which selectively biotinylates protein N-termini except those with proline in the second position. CHOPS can, in theory, discover substrates for any protease, but is particularly well-suited to discover canonical DPP substrates, as cleaved but not...

    Subject
    Biotin
    Leukemia
    Mass spectrometry
    Peptide Hydrolases
    Substrate Specificity
    Access Rights
    Free to All
  • HEK293T cell translatome analysis upon 6-MP treatment. Related to Supplementary Table 6 from An et al (2020)

    Authors
    Ordureau, Alban Simon Georges
    Harper, Wade J.
    Description

    HEK293T cells were treated with 6-MP and harvested at various time point (6, 9 and 18h). Translatome was measure by Azidohomoalanine (AHA) incorporation, Biotin-click, and streptavidin enrichment.

    Subject
    Biotin
    Cell Culture Techniques
    HEK293 Cells
    Mass spectrometry
    Access Rights
    Free to All