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An epigenetic program established by gene – environment interactions initiates pancreatic carcinogenesis [ATAC-seq]
- Authors
- Alonso-Curbelo, DirenaLowe, Scott W.
- Description
Summary from GEO: "Damaged tissues have increased risk of cancer development through poorly understood mechanisms. For example, in the pancreas, tissue damage collaborates with activating mutations in the Kras oncogene to dramatically accelerate the formation of early neoplastic lesions and, ultimately, pancreatic cancer. By integrating genomics, single-cell chromatin assays and spatiotemporally-controlled...
- Subject
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CarcinogenesisChromatin Immunoprecipitation SequencingEpithelial CellsGenes, rasGenomicsInterleukin-33Pancreatic Neoplasms
- Access Rights
- Free to All
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An epigenetic program established by gene – environment interactions initiates pancreatic carcinogenesis [Set2]
- Authors
- Alonso-Curbelo, DirenaLowe, Scott W.
- Description
Summary from GEO: "Damaged tissues have increased risk of cancer development through poorly understood mechanisms. In the pancreas, tissue damage collaborates with activating mutations in the Kras oncogene to dramatically accelerate the formation of early neoplastic lesions and ultimately pancreatic cancer. By integrating genomics, single-cell chromatin assays and spatiotemporally-controlled functional...
- Subject
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CarcinogenesisChromatin Immunoprecipitation SequencingDoxycyclineEpithelial CellsGenes, rasGenomicsInterleukin-33Pancreatic Neoplasms
- Access Rights
- Free to All
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An epigenetic program established by gene – environment interactions initiates pancreatic carcinogenesis [scATAC-Seq]
- Authors
- Alonso-Curbelo, DirenaLowe, Scott W.
- Description
Summary from GEO: "Damaged tissues have increased risk of cancer development through poorly understood mechanisms. For example, in the pancreas, tissue damage collaborates with activating mutations in the Kras oncogene to dramatically accelerate the formation of early neoplastic lesions and, ultimately, pancreatic cancer. By integrating genomics, single-cell chromatin assays and spatiotemporally-controlled...
- Subject
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CarcinogenesisChromatin Immunoprecipitation SequencingEpithelial CellsGenes, rasGenomicsInterleukin-33Pancreatic Neoplasms
- Access Rights
- Free to All
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An epigenetic program established by gene – environment interactions initiates pancreatic carcinogenesis [ATACSeq_shBrd4]
- Authors
- Alonso-Curbelo, DirenaKoche, Richard PatrickLowe, Scott W.
- Description
Summary from GEO: "Damaged tissues have increased risk of cancer development through poorly understood mechanisms. In the pancreas, tissue damage collaborates with activating mutations in the Kras oncogene to dramatically accelerate the formation of early neoplastic lesions and ultimately pancreatic cancer. By integrating genomics, single-cell chromatin assays and spatiotemporally-controlled functional...
- Subject
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CarcinogenesisChromatin Immunoprecipitation SequencingEpithelial CellsGenes, rasGenomicsInterleukin-33Pancreatic Neoplasms
- Access Rights
- Free to All
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An epigenetic program established by gene – environment interactions initiates pancreatic carcinogenesis [ATACSeq_rIL33]
- Authors
- Alonso-Curbelo, DirenaKoche, Richard PatrickLowe, Scott W.
- Description
Summary from GEO: "Damaged tissues have increased risk of cancer development through poorly understood mechanisms. In the pancreas, tissue damage collaborates with activating mutations in the Kras oncogene to dramatically accelerate the formation of early neoplastic lesions and ultimately pancreatic cancer. By integrating genomics, single-cell chromatin assays and spatiotemporally-controlled functional...
- Subject
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CarcinogenesisChromatin Immunoprecipitation SequencingEpithelial CellsGenes, rasGenomicsInterleukin-33Pancreatic Neoplasms
- Access Rights
- Free to All
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An epigenetic program established by gene – environment interactions initiates pancreatic carcinogenesis [Set3]
- Authors
- Alonso-Curbelo, DirenaLowe, Scott W.
- Description
Summary from GEO: "Damaged tissues have increased risk of cancer development through poorly understood mechanisms. In the pancreas, tissue damage collaborates with activating mutations in the Kras oncogene to dramatically accelerate the formation of early neoplastic lesions and ultimately pancreatic cancer. By integrating genomics, single-cell chromatin assays and spatiotemporally-controlled functional...
- Subject
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CarcinogenesisEpithelial CellsGenes, rasGenomicsInterleukin-33Pancreatic NeoplasmsRNA-Seq
- Access Rights
- Free to All
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Notch3 signaling promotes tumor cell adhesion and progression in a murine epithelial ovarian cancer model
- Authors
- Price, Jessica C.Azizi, ElhamParvani, Jenny G.Shukla, Priyanka5 more author(s)...
- Description
Summary from GEO: "High grade serous ovarian cancer (HGSC) is the most common and deadly type of ovarian cancer, largely due to difficulties in early diagnosis and rapid metastasis throughout the peritoneal cavity. Previous studies have shown that expression of Notch3 correlates with worse prognosis and increased tumorigenic cell behaviors in HGSC. We investigated the mechanistic role of Notch3 in...
- Subject
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CarcinogenesisCarcinoma, Ovarian EpithelialEpithelial CellsOvarian NeoplasmsReceptor, Notch3RNA-Seq
- Access Rights
- Free to All
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Modeling cancer-associated mutations reveals an integrated role for the Pol epsilon catalytic core in replisome assembly and DNA synthesis
- Authors
- Meng, XiangzhouZhao, XiaolanZhang, TuoXiang, Jenny
- Description
Summary from GEO: "DNA polymerase epsilon (Pol epsilon) plays multiple roles in genome duplication and its catalytic subunit POLE suppresses tumorigenesis in humans. Despite its importance, we have limited understanding of Pol epsilon functional mechanisms and how its loss-of-function affects the evolution of cancer genomes. To address this issue, we used the budding yeast ortholog Pol2 to model...
- Subject
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CarcinogenesisCatalytic DomainDNA Polymerase IITumor Suppressor Proteins
- Access Rights
- Free to All
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Epigenetic plasticity cooperates with emergent cell-cell interactions to drive neoplastic tissue remodeling in the pancreas [scRNA-seq]
- Authors
- Burdziak, CassandraAlonso-Curbelo, DirenaPe'er, DanaLowe, Scott W.
- Description
Summary from GEO: "In pancreatic cancer, select cells within a homogeneous epithelium drive tumorigenesis in response to an environmental trigger, suggesting key uncharacterized roles for epigenetics and cellular context. To investigate epigenetic plasticity in early tumorigenesis, we performed single-cell transcriptional and chromatin accessibility sequencing of Kras-mutant pancreatic cancer models,...
- Subject
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AdenocarcinomaCarcinogenesisCarcinoma, Pancreatic DuctalCell PlasticityPancreatic NeoplasmsRNA-Seq
- Access Rights
- Free to All
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Epigenetic plasticity cooperates with emergent cell-cell interactions to drive neoplastic tissue remodeling in the pancreas [ATAC-seq]
- Authors
- Burdziak, CassandraAlonso-Curbelo, DirenaPe'er, DanaLowe, Scott W.
- Description
Summary from GEO: "In pancreatic cancer, select cells within a homogeneous epithelium drive tumorigenesis in response to an environmental trigger, suggesting key uncharacterized roles for epigenetics and cellular context. To investigate epigenetic plasticity in early tumorigenesis, we performed single-cell transcriptional and chromatin accessibility sequencing of Kras-mutant pancreatic cancer models,...
- Subject
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AdenocarcinomaCarcinogenesisCarcinoma, Pancreatic DuctalCell PlasticityChromatin Immunoprecipitation SequencingPancreatic Neoplasms
- Access Rights
- Free to All