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  • Epigenetic plasticity cooperates with emergent cell-cell interactions to drive neoplastic tissue remodeling in the pancreas [scRNA-seq]

    Authors
    Burdziak, Cassandra
    Alonso-Curbelo, Direna
    Pe'er, Dana
    Lowe, Scott W.
    Description

    Summary from GEO: "In pancreatic cancer, select cells within a homogeneous epithelium drive tumorigenesis in response to an environmental trigger, suggesting key uncharacterized roles for epigenetics and cellular context. To investigate epigenetic plasticity in early tumorigenesis, we performed single-cell transcriptional and chromatin accessibility sequencing of Kras-mutant pancreatic cancer models,...

    Subject
    Adenocarcinoma
    Carcinogenesis
    Carcinoma, Pancreatic Ductal
    Cell Plasticity
    Pancreatic Neoplasms
    RNA-Seq
    Access Rights
    Free to All
  • Epigenetic plasticity cooperates with emergent cell-cell interactions to drive neoplastic tissue remodeling in the pancreas [ATAC-seq]

    Authors
    Burdziak, Cassandra
    Alonso-Curbelo, Direna
    Pe'er, Dana
    Lowe, Scott W.
    Description

    Summary from GEO: "In pancreatic cancer, select cells within a homogeneous epithelium drive tumorigenesis in response to an environmental trigger, suggesting key uncharacterized roles for epigenetics and cellular context. To investigate epigenetic plasticity in early tumorigenesis, we performed single-cell transcriptional and chromatin accessibility sequencing of Kras-mutant pancreatic cancer models,...

    Subject
    Adenocarcinoma
    Carcinogenesis
    Carcinoma, Pancreatic Ductal
    Cell Plasticity
    Chromatin Immunoprecipitation Sequencing
    Pancreatic Neoplasms
    Access Rights
    Free to All
  • Epigenetic plasticity cooperates with emergent cell-cell interactions to drive neoplastic tissue remodeling in the pancreas [Bulk ATAC-seq]

    Authors
    Burdziak, Cassandra
    Alonso-Curbelo, Direna
    Pe'er, Dana
    Lowe, Scott W.
    Description

    Summary from GEO: "In pancreatic cancer, select cells within a homogeneous epithelium drive tumorigenesis in response to an environmental trigger, suggesting key uncharacterized roles for epigenetics and cellular context. To investigate epigenetic plasticity in early tumorigenesis, we performed single-cell transcriptional and chromatin accessibility sequencing of Kras-mutant pancreatic cancer models,...

    Subject
    Adenocarcinoma
    Carcinogenesis
    Carcinoma, Pancreatic Ductal
    Cell Plasticity
    Chromatin Immunoprecipitation Sequencing
    Pancreatic Neoplasms
    Access Rights
    Free to All
  • Systematic comparison of pancreatic ductal adenocarcinoma models identifies a conserved highly plastic basal cell state

    Authors
    Pitter, Ken L.
    Grbovic-Huezo, Olivera
    Joost, Simon
    Tammela, Tuomas
    Description

    Summary from GEO: "Pancreatic ductal adenocarcinoma (PDAC) portends a dire prognosis. Intra-tumoral heterogeneity and cellular plasticity have emerged as hallmarks of cancer, including PDAC. Yet, our understanding of the mechanisms underpinning cellular diversity in PDAC remains limited. Here, we investigate cellular heterogeneity of PDAC cancer cells across a range of in vitro and in vivo growth...

    Subject
    Carcinoma, Pancreatic Ductal
    Cell Plasticity
    Pancreatic Neoplasms
    RNA-Seq
    Access Rights
    Free to All