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Epigenetic plasticity cooperates with emergent cell-cell interactions to drive neoplastic tissue remodeling in the pancreas [scRNA-seq]
- Authors
- Burdziak, CassandraAlonso-Curbelo, DirenaPe'er, DanaLowe, Scott W.
- Description
Summary from GEO: "In pancreatic cancer, select cells within a homogeneous epithelium drive tumorigenesis in response to an environmental trigger, suggesting key uncharacterized roles for epigenetics and cellular context. To investigate epigenetic plasticity in early tumorigenesis, we performed single-cell transcriptional and chromatin accessibility sequencing of Kras-mutant pancreatic cancer models,...
- Subject
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AdenocarcinomaCarcinogenesisCarcinoma, Pancreatic DuctalCell PlasticityPancreatic NeoplasmsRNA-Seq
- Access Rights
- Free to All
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Epigenetic plasticity cooperates with emergent cell-cell interactions to drive neoplastic tissue remodeling in the pancreas [ATAC-seq]
- Authors
- Burdziak, CassandraAlonso-Curbelo, DirenaPe'er, DanaLowe, Scott W.
- Description
Summary from GEO: "In pancreatic cancer, select cells within a homogeneous epithelium drive tumorigenesis in response to an environmental trigger, suggesting key uncharacterized roles for epigenetics and cellular context. To investigate epigenetic plasticity in early tumorigenesis, we performed single-cell transcriptional and chromatin accessibility sequencing of Kras-mutant pancreatic cancer models,...
- Subject
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AdenocarcinomaCarcinogenesisCarcinoma, Pancreatic DuctalCell PlasticityChromatin Immunoprecipitation SequencingPancreatic Neoplasms
- Access Rights
- Free to All
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Epigenetic plasticity cooperates with emergent cell-cell interactions to drive neoplastic tissue remodeling in the pancreas [Bulk ATAC-seq]
- Authors
- Burdziak, CassandraAlonso-Curbelo, DirenaPe'er, DanaLowe, Scott W.
- Description
Summary from GEO: "In pancreatic cancer, select cells within a homogeneous epithelium drive tumorigenesis in response to an environmental trigger, suggesting key uncharacterized roles for epigenetics and cellular context. To investigate epigenetic plasticity in early tumorigenesis, we performed single-cell transcriptional and chromatin accessibility sequencing of Kras-mutant pancreatic cancer models,...
- Subject
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AdenocarcinomaCarcinogenesisCarcinoma, Pancreatic DuctalCell PlasticityChromatin Immunoprecipitation SequencingPancreatic Neoplasms
- Access Rights
- Free to All
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Systematic comparison of pancreatic ductal adenocarcinoma models identifies a conserved highly plastic basal cell state
- Authors
- Pitter, Ken L.Grbovic-Huezo, OliveraJoost, SimonTammela, Tuomas
- Description
Summary from GEO: "Pancreatic ductal adenocarcinoma (PDAC) portends a dire prognosis. Intra-tumoral heterogeneity and cellular plasticity have emerged as hallmarks of cancer, including PDAC. Yet, our understanding of the mechanisms underpinning cellular diversity in PDAC remains limited. Here, we investigate cellular heterogeneity of PDAC cancer cells across a range of in vitro and in vivo growth...
- Subject
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Carcinoma, Pancreatic DuctalCell PlasticityPancreatic NeoplasmsRNA-Seq
- Access Rights
- Free to All