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Results Found: 5
  • Cancer Therapy and Clonal Hematopoiesis (MSK, Clin Cancer Res 2022)

    Description

    Clonal hematopoiesis mutations identified in blood samples from patients whose tumor-blood pairs were analyzed using MSK-IMPACT. The clinical data includes mutation count, information about mutated genes, patient demographics, and information about treatment. The data set also includes charts visualizing data summaries and customizable plotting tool.

    Subject
    Clinical Trial
    Drug Therapy
    Hematopoiesis
    Mutation/genetics
    Access Rights
    Free to All
  • CoMMpass IA19: Data from "Gene interaction network analysis in multiple myeloma detects complex immune dysregulation associated with shorter survival"

    Description

    The Multiple Myeloma Research Foundation (MMRF) runs a multi-site longitudinal clinical registry study of patients newly diagnosed with MM. This project is called CoMMpass, and collects both clinical and genomic information periodically. Researchers used interim analysis 19 (IA19) for their conclusions in "Gene interaction network analysis in multiple myeloma detects complex immune dysregulation...

    Subject
    Clinical Trial
    DNA Copy Number Variations
    Genomics
    Multiple Myeloma
    RNA-Seq
    Whole Genome Sequencing
    Access Rights
    Free to all with registration
  • Whole exome and whole genome sequencing of pancreatic cancer

    Description

    Description from EGA: "These are seven sequencing files form whole exome and whole genome of five tissue samples collected from one pancreatic cancer patient" Dataset is also accessioned as a study, associated with publication "An unusual genomic variant of pancreatic ductal adenocarcinoma with an indolent clinical course," (Kohutek, et. al.), under accession number EGAS00001002192.

    Subject
    Carcinoma, Pancreatic Ductal
    Clinical Trial
    Exome Sequencing
    Pancreatic Neoplasms
    Whole Genome Sequencing
    Access Rights
    Free to All
  • MSK-CHORD (MSK, Nature 2024)

    Description

    This dataset contains summary data visualizations and clinical data from targeted sequencing of 25040 tumors from 24950 patients and their matched normals via MSK-IMPACT, along with clinical annotations, some of which are derived from natural language processing (denoted NLP). This data is available under the Creative Commons BY-NC-ND 4.0 license. For commercial use, please contact datarequests@mskcc.org....

    Subject
    Clinical Trial
    Data Visualization
    Machine Learning
    Sequence Analysis
    Access Rights
    Free to All
  • Breast Cancer (METABRIC, Nature 2012 & Nat Commun 2016)

    Description

    This dataset contains summary data visualizations and clinical data from target sequencing analysis of 2509 primary breast tumors from 2,509 patients. The study was conducted to identify putative cancer genes, revealing novel subgroups with distinct clinical outcomes. The results were validated by long-term clinical follow-up. The clinical data includes mutated genes, 3-gene classifier subtypes, and...

    Subject
    Breast Neoplasms
    Clinical Trial
    Data Visualization
    Sequence Analysis
    Access Rights
    Free to All