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Results Found: 5
  • Human lineage tracing enabled by mitochondrial mutations and single cell genomics [TF1_clones_ATAC]

    Authors
    Ludwig, Leif S.
    Lareau, Caleb A.
    Description

    Summary from GEO: "Lineage tracing provides unprecedented insights into the fate of individual cells and their progeny in complex organisms. While effective genetic approaches have been developed in vitro and in animal models, these cannot be used to interrogate human physiology in vivo. Instead, naturally occurring somatic mutations have been utilized to infer clonality and lineal relationships...

    Subject
    Cell Lineage
    Chromatin Immunoprecipitation Sequencing
    DNA, Mitochondrial
    Single-Cell Analysis
    Access Rights
    Free to All
  • Human lineage tracing enabled by mitochondrial mutations and single cell genomics [TF1_clones_scRNA]

    Authors
    Ludwig, Leif S.
    Lareau, Caleb A.
    Description

    Summary from GEO: "Lineage tracing provides unprecedented insights into the fate of individual cells and their progeny in complex organisms. While effective genetic approaches have been developed in vitro and in animal models, these cannot be used to interrogate human physiology in vivo. Instead, naturally occurring somatic mutations have been utilized to infer clonality and lineal relationships...

    Subject
    Cell Lineage
    DNA, Mitochondrial
    RNA-Seq
    Single-Cell Analysis
    Access Rights
    Free to All
  • Human lineage tracing enabled by mitochondrial mutations and single cell genomics [TF1_clones_RNA]

    Authors
    Ludwig, Leif S.
    Lareau, Caleb A.
    Description

    Summary from GEO: "Lineage tracing provides unprecedented insights into the fate of individual cells and their progeny in complex organisms. While effective genetic approaches have been developed in vitro and in animal models, these cannot be used to interrogate human physiology in vivo. Instead, naturally occurring somatic mutations have been utilized to infer clonality and lineal relationships...

    Subject
    Cell Lineage
    DNA, Mitochondrial
    RNA-Seq
    Single-Cell Analysis
    Access Rights
    Free to All
  • High throughput joint profiling of chromatin accessibility and protein levels in single cells [marrow]

    Authors
    Mimitou, Eleni P.
    Lareau, Caleb A.
    Chen, Kelvin Y.
    Ludwig, Leif S.
    1 more author(s)...
    Description

    Summary from GEO: "Recent technological advances have enabled massively parallel single-cell Assay for Transposase Accessible Chromatin by sequencing (scATAC-seq) to simultaneously profile the epigenomic landscape in thousands of individual cells. scATAC-seq methods sample genomic DNA accessible to transposases, but have not previously been combined with measurement of protein levels. Here, we present...

    Subject
    Bone Marrow Examination
    Cell Differentiation
    Chromatin Immunoprecipitation Sequencing
    DNA, Mitochondrial
    Hematopoiesis
    Access Rights
    Free to All
  • Mitochondrial DNA drives tumor dormancy escape in ER+ breast cancer

    Authors
    Sansone, Pasquale
    Bromberg, Jacqueline
    Description

    Summary from GEO: "Although the estrogen receptor (ER) positive variant of breast cancer is touted as the most indolent and favorable, the majority of breast cancer deaths are in fact from this subtype. There are several features of this category of breast cancers that likely account for this outcome. The first is that metastatic relapse can occur many years after initial diagnosis of primary disease....

    Subject
    Breast Neoplasms
    DNA, Mitochondrial
    Neoplasm Metastasis
    Receptors, Estrogen
    Access Rights
    Free to All