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Results Found: 3
  • Histone H1 loss drives lymphoma by disrupting 3D chromatin architecture

    Authors
    Yusufova, Nevin
    Teater, Matt
    Cesarman, Ethel
    Melnick, Ari M.
    1 more author(s)...
    Description

    Summary from the GEO: "Linker histone H1 proteins bind to nucleosomes and cause chromatin compaction, although little is known about their biological functions. Histone H1 (HIST1H1B-E) mutations are highly recurrent in B-cell lymphomas and are present in solid tumors, but their cancer relevance and mechanism are unknown. Here we report that lymphoma-associated H1 alleles are genetic driver mutations...

    Subject
    B-Lymphocytes
    Gene Silencing
    Genes, Tumor Suppressor
    Histones
    Lymphoma
    Sequence Analysis
    Access Rights
    Free to All
  • Pan KRAS inhibitor selectively inactivates oncogenic signaling and tumor growth

    Authors
    Lito, Piro
    Kim, Dongsung
    Description

    Summary from GEO: "To investigate the effect of KRASi treatment on transcriptional output, we sequenced RNAs from 22 cell lines with different KRAS genotypes. We then performed gene expression profiling analysis using data obtained from RNA-seq comparing untreated and 2hr treated samples." Overall design from GEO: "Comparative gene expression profiling analysis of RNA-seq data for cells with...

    Subject
    Gene Expression Profiling
    Genes, ras
    Genes, Tumor Suppressor
    RNA-Seq
    Access Rights
    Free to All
  • Reversal of lineage plasticity in RB1/TP53-deleted prostate cancer through FGFR and Janus kinase inhibition

    Authors
    Sawyers, Charles L.
    Pe'er, Dana
    Chan, Joseph
    Karthaus, Wouter Richard
    Description

    Summary from GEO: "The inherent plasticity of tumor cells provides a mechanism of resistance to many molecularly targeted therapies, exemplified by adeno-to-neuroendocrine lineage transitions seen in prostate and lung cancer. Here we investigate the root cause of this lineage plasticity in a primary murine prostate organoid model that mirrors the lineage transition seen in patients. These cells lose...

    Subject
    Cell Lineage
    Gene Deletion
    Genes, Tumor Suppressor
    Janus Kinases
    Prostatic Neoplasms
    Protein-Tyrosine Kinases
    Single-Cell Analysis
    Access Rights
    Free to All