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Results Found: 13
  • SMYD5 regulates H4K20me3-marked heterochromatin to safeguard ES cell self-renewal and prevent spurious differentiation [ChIP-Seq]

    Authors
    Kidder, Benjamin L.
    Zhao, Keji
    Description

    Summary from the GEO:"Epigenetic regulation of chromatin states is thought to control the self-renewal and differentiation of embryonic stem (ES) cells. However, the roles of repressive histone modifications such as trimethylated histone lysine 20 (H4K20me3) in pluripotency and development are largely unknown. Here, we show that the histone lysine methyltransferase SMYD5 mediates H4K20me3 at heterochromatin...

    Subject
    Chromatin Immunoprecipitation Sequencing
    DNA Methylation
    Gene Silencing
    Histone Code
    Histone-Lysine N-Methyltransferase
    Methyltransferases
    RNA Interference
    Tumor Suppressor Proteins
    Access Rights
    Free to All
  • SMYD5 regulates H4K20me3-marked heterochromatin to safeguard ES cell self-renewal and prevent spurious differentiation [RNA-Seq]

    Authors
    Kidder, Benjamin L.
    Zhao, Keji
    Description

    Summary from the GEO: "Epigenetic regulation of chromatin states is thought to control the self-renewal and differentiation of embryonic stem (ES) cells. However, the roles of repressive histone modifications such as trimethylated histone lysine 20 (H4K20me3) in pluripotency and development are largely unknown. Here, we show that the histone lysine methyltransferase SMYD5 mediates H4K20me3 at heterochromatin...

    Subject
    Chromatin Immunoprecipitation Sequencing
    DNA Methylation
    Gene Silencing
    Histone Code
    Histone-Lysine N-Methyltransferase
    Methyltransferases
    RNA Interference
    Tumor Suppressor Proteins
    Access Rights
    Free to All
  • SMYD5 regulates H4K20me3-marked heterochromatin to safeguard ES cell self-renewal and prevent spurious differentiation

    Authors
    Kidder, Benjamin L.
    Description

    Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Summary: This SuperSeries is composed of the SubSeries GSE94033 and GSE94085. Article summary that correlates to the GEO: "Epigenetic regulation of chromatin states is thought to control the self-renewal and differentiation of embryonic stem (ES) cells. However, the roles of repressive...

    Subject
    Chromatin Immunoprecipitation Sequencing
    DNA Methylation
    Gene Silencing
    Histone Code
    Histone-Lysine N-Methyltransferase
    Methyltransferases
    RNA Interference
    Tumor Suppressor Proteins
    Access Rights
    Free to All
  • Chromatin regulation of transcriptional enhancers and cell fate by the Sotos syndrome gene NSD1 [ChIP-seq]

    Authors
    Sun, Zhen
    Helin, Kristian
    Description

    Summary from GEO: "Nuclear-receptor-binding SET-domain protein 1 (NSD1), a methyltransferase that catalyzes H3K36me2, is essential for mammalian development and frequently dysregulated in diseases, including a spectrum of cancers and the genetic disorder Sotos syndrome. Despite its function in modulating the chromatin landscape, a direct role of NSD1 in transcriptional regulation remains largely...

    Subject
    Chromatin
    Chromatin Immunoprecipitation Sequencing
    Histone-Lysine N-Methyltransferase
    Nuclear Proteins
    Sotos Syndrome
    Access Rights
    Free to All
  • Chromatin regulation of transcriptional enhancers and cell fate by the Sotos syndrome gene NSD1 [CUT&RUN]

    Authors
    Sun, Zhen
    Helin, Kristian
    Description

    Summary from GEO: "Nuclear-receptor-binding SET-domain protein 1 (NSD1), a methyltransferase that catalyzes H3K36me2, is essential for mammalian development and frequently dysregulated in diseases, including a spectrum of cancers and the genetic disorder Sotos syndrome. Despite its function in modulating the chromatin landscape, a direct role of NSD1 in transcriptional regulation remains largely...

    Subject
    Chromatin
    Histone-Lysine N-Methyltransferase
    Nuclear Proteins
    Sotos Syndrome
    Access Rights
    Free to All
  • Chromatin regulation of transcriptional enhancers and cell fate by the Sotos syndrome gene NSD1 [ATAC-seq]

    Authors
    Sun, Zhen
    Helin, Kristian
    Description

    Summary from GEO: "Nuclear-receptor-binding SET-domain protein 1 (NSD1), a methyltransferase that catalyzes H3K36me2, is essential for mammalian development and frequently dysregulated in diseases, including Sotos syndrome. Despite impacts of H3K36me2 on H3K27me3 and DNA methylation, a direct role of NSD1 in transcriptional regulation remains largely unknown. Here, we show that NSD1 and H3K36me2...

    Subject
    Chromatin
    Chromatin Immunoprecipitation Sequencing
    Histone-Lysine N-Methyltransferase
    Nuclear Proteins
    Sotos Syndrome
    Access Rights
    Free to All
  • Chromatin regulation of transcriptional enhancers and cell fate by the Sotos syndrome gene NSD1 [SLAM-seq]

    Authors
    Sun, Zhen
    Helin, Kristian
    Description

    Summary from GEO: "Nuclear-receptor-binding SET-domain protein 1 (NSD1), a methyltransferase that catalyzes H3K36me2, is essential for mammalian development and frequently dysregulated in diseases, including a spectrum of cancers and the genetic disorder Sotos syndrome. Despite its function in modulating the chromatin landscape, a direct role of NSD1 in transcriptional regulation remains largely...

    Subject
    Chromatin
    Histone-Lysine N-Methyltransferase
    Nuclear Proteins
    Sequence Analysis, RNA
    Sotos Syndrome
    Access Rights
    Free to All
  • Chromatin regulation of transcriptional enhancers and cell fate by the Sotos syndrome gene NSD1 [RNA-seq]

    Authors
    Sun, Zhen
    Helin, Kristian
    Description

    Summary from GEO: "Nuclear-receptor-binding SET-domain protein 1 (NSD1), a methyltransferase that catalyzes H3K36me2, is essential for mammalian development and frequently dysregulated in diseases, including Sotos syndrome. Despite impacts of H3K36me2 on H3K27me3 and DNA methylation, a direct role of NSD1 in transcriptional regulation remains largely unknown. Here, we show that NSD1 and H3K36me2...

    Subject
    Chromatin
    Histone-Lysine N-Methyltransferase
    Nuclear Proteins
    RNA-Seq
    Sotos Syndrome
    Access Rights
    Free to All
  • Chromatin regulation of transcriptional enhancers and cell fate by the Sotos syndrome gene NSD1 [RRBS]

    Authors
    Sun, Zhen
    Helin, Kristian
    Description

    Summary from GEO: "Nuclear-receptor-binding SET-domain protein 1 (NSD1), a methyltransferase that catalyzes H3K36me2, is essential for mammalian development and frequently dysregulated in diseases, including Sotos syndrome. Despite impacts of H3K36me2 on H3K27me3 and DNA methylation, a direct role of NSD1 in transcriptional regulation remains largely unknown. Here, we show that NSD1 and H3K36me2...

    Subject
    Chromatin
    Histone-Lysine N-Methyltransferase
    Nuclear Proteins
    Sequence Analysis, DNA
    Sotos Syndrome
    Access Rights
    Free to All
  • Chromatin regulation of transcriptional enhancers and cell fate by the Sotos syndrome gene NSD1 [TT-Seq]

    Authors
    Sun, Zhen
    Helin, Kristian
    Description

    Summary from GEO: "Nuclear-receptor-binding SET-domain protein 1 (NSD1), a methyltransferase that catalyzes H3K36me2, is essential for mammalian development and frequently dysregulated in diseases, including Sotos syndrome. Despite impacts of H3K36me2 on H3K27me3 and DNA methylation, a direct role of NSD1 in transcriptional regulation remains largely unknown. Here, we show that NSD1 and H3K36me2...

    Subject
    Chromatin
    Histone-Lysine N-Methyltransferase
    Nuclear Proteins
    Sequence Analysis, RNA
    Sotos Syndrome
    Access Rights
    Free to All