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SMYD5 regulates H4K20me3-marked heterochromatin to safeguard ES cell self-renewal and prevent spurious differentiation [ChIP-Seq]
- Authors
- Kidder, Benjamin L.Zhao, Keji
- Description
Summary from the GEO:"Epigenetic regulation of chromatin states is thought to control the self-renewal and differentiation of embryonic stem (ES) cells. However, the roles of repressive histone modifications such as trimethylated histone lysine 20 (H4K20me3) in pluripotency and development are largely unknown. Here, we show that the histone lysine methyltransferase SMYD5 mediates H4K20me3 at heterochromatin...
- Subject
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Chromatin Immunoprecipitation SequencingDNA MethylationGene SilencingHistone CodeHistone-Lysine N-MethyltransferaseMethyltransferasesRNA InterferenceTumor Suppressor Proteins
- Access Rights
- Free to All
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SMYD5 regulates H4K20me3-marked heterochromatin to safeguard ES cell self-renewal and prevent spurious differentiation [RNA-Seq]
- Authors
- Kidder, Benjamin L.Zhao, Keji
- Description
Summary from the GEO: "Epigenetic regulation of chromatin states is thought to control the self-renewal and differentiation of embryonic stem (ES) cells. However, the roles of repressive histone modifications such as trimethylated histone lysine 20 (H4K20me3) in pluripotency and development are largely unknown. Here, we show that the histone lysine methyltransferase SMYD5 mediates H4K20me3 at heterochromatin...
- Subject
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Chromatin Immunoprecipitation SequencingDNA MethylationGene SilencingHistone CodeHistone-Lysine N-MethyltransferaseMethyltransferasesRNA InterferenceTumor Suppressor Proteins
- Access Rights
- Free to All
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SMYD5 regulates H4K20me3-marked heterochromatin to safeguard ES cell self-renewal and prevent spurious differentiation
- Authors
- Kidder, Benjamin L.
- Description
Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Summary: This SuperSeries is composed of the SubSeries GSE94033 and GSE94085. Article summary that correlates to the GEO: "Epigenetic regulation of chromatin states is thought to control the self-renewal and differentiation of embryonic stem (ES) cells. However, the roles of repressive...
- Subject
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Chromatin Immunoprecipitation SequencingDNA MethylationGene SilencingHistone CodeHistone-Lysine N-MethyltransferaseMethyltransferasesRNA InterferenceTumor Suppressor Proteins
- Access Rights
- Free to All
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Chromatin regulation of transcriptional enhancers and cell fate by the Sotos syndrome gene NSD1 [ChIP-seq]
- Authors
- Sun, ZhenHelin, Kristian
- Description
Summary from GEO: "Nuclear-receptor-binding SET-domain protein 1 (NSD1), a methyltransferase that catalyzes H3K36me2, is essential for mammalian development and frequently dysregulated in diseases, including a spectrum of cancers and the genetic disorder Sotos syndrome. Despite its function in modulating the chromatin landscape, a direct role of NSD1 in transcriptional regulation remains largely...
- Subject
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ChromatinChromatin Immunoprecipitation SequencingHistone-Lysine N-MethyltransferaseNuclear ProteinsSotos Syndrome
- Access Rights
- Free to All
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Chromatin regulation of transcriptional enhancers and cell fate by the Sotos syndrome gene NSD1 [CUT&RUN]
- Authors
- Sun, ZhenHelin, Kristian
- Description
Summary from GEO: "Nuclear-receptor-binding SET-domain protein 1 (NSD1), a methyltransferase that catalyzes H3K36me2, is essential for mammalian development and frequently dysregulated in diseases, including a spectrum of cancers and the genetic disorder Sotos syndrome. Despite its function in modulating the chromatin landscape, a direct role of NSD1 in transcriptional regulation remains largely...
- Subject
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ChromatinHistone-Lysine N-MethyltransferaseNuclear ProteinsSotos Syndrome
- Access Rights
- Free to All
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Chromatin regulation of transcriptional enhancers and cell fate by the Sotos syndrome gene NSD1 [ATAC-seq]
- Authors
- Sun, ZhenHelin, Kristian
- Description
Summary from GEO: "Nuclear-receptor-binding SET-domain protein 1 (NSD1), a methyltransferase that catalyzes H3K36me2, is essential for mammalian development and frequently dysregulated in diseases, including Sotos syndrome. Despite impacts of H3K36me2 on H3K27me3 and DNA methylation, a direct role of NSD1 in transcriptional regulation remains largely unknown. Here, we show that NSD1 and H3K36me2...
- Subject
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ChromatinChromatin Immunoprecipitation SequencingHistone-Lysine N-MethyltransferaseNuclear ProteinsSotos Syndrome
- Access Rights
- Free to All
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Chromatin regulation of transcriptional enhancers and cell fate by the Sotos syndrome gene NSD1 [SLAM-seq]
- Authors
- Sun, ZhenHelin, Kristian
- Description
Summary from GEO: "Nuclear-receptor-binding SET-domain protein 1 (NSD1), a methyltransferase that catalyzes H3K36me2, is essential for mammalian development and frequently dysregulated in diseases, including a spectrum of cancers and the genetic disorder Sotos syndrome. Despite its function in modulating the chromatin landscape, a direct role of NSD1 in transcriptional regulation remains largely...
- Subject
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ChromatinHistone-Lysine N-MethyltransferaseNuclear ProteinsSequence Analysis, RNASotos Syndrome
- Access Rights
- Free to All
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Chromatin regulation of transcriptional enhancers and cell fate by the Sotos syndrome gene NSD1 [RNA-seq]
- Authors
- Sun, ZhenHelin, Kristian
- Description
Summary from GEO: "Nuclear-receptor-binding SET-domain protein 1 (NSD1), a methyltransferase that catalyzes H3K36me2, is essential for mammalian development and frequently dysregulated in diseases, including Sotos syndrome. Despite impacts of H3K36me2 on H3K27me3 and DNA methylation, a direct role of NSD1 in transcriptional regulation remains largely unknown. Here, we show that NSD1 and H3K36me2...
- Subject
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ChromatinHistone-Lysine N-MethyltransferaseNuclear ProteinsRNA-SeqSotos Syndrome
- Access Rights
- Free to All
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Chromatin regulation of transcriptional enhancers and cell fate by the Sotos syndrome gene NSD1 [RRBS]
- Authors
- Sun, ZhenHelin, Kristian
- Description
Summary from GEO: "Nuclear-receptor-binding SET-domain protein 1 (NSD1), a methyltransferase that catalyzes H3K36me2, is essential for mammalian development and frequently dysregulated in diseases, including Sotos syndrome. Despite impacts of H3K36me2 on H3K27me3 and DNA methylation, a direct role of NSD1 in transcriptional regulation remains largely unknown. Here, we show that NSD1 and H3K36me2...
- Subject
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ChromatinHistone-Lysine N-MethyltransferaseNuclear ProteinsSequence Analysis, DNASotos Syndrome
- Access Rights
- Free to All
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Chromatin regulation of transcriptional enhancers and cell fate by the Sotos syndrome gene NSD1 [TT-Seq]
- Authors
- Sun, ZhenHelin, Kristian
- Description
Summary from GEO: "Nuclear-receptor-binding SET-domain protein 1 (NSD1), a methyltransferase that catalyzes H3K36me2, is essential for mammalian development and frequently dysregulated in diseases, including Sotos syndrome. Despite impacts of H3K36me2 on H3K27me3 and DNA methylation, a direct role of NSD1 in transcriptional regulation remains largely unknown. Here, we show that NSD1 and H3K36me2...
- Subject
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ChromatinHistone-Lysine N-MethyltransferaseNuclear ProteinsSequence Analysis, RNASotos Syndrome
- Access Rights
- Free to All