MSK-IMPACT Clinical Sequencing Cohort (MSKCC, Nat Med 2017): Targeted sequencing of 10,000 clinical cases using the MSK-IMPACT assay

Description

This dataset contains summary data visualizations and clinical data from the targeted sequencing of 10,000 clinical cases using the MSK-IMPACT assay. The clinical data includes mutation count, information about mutated genes, tumor mutational burden calculations, tissue site from which the sample was derived, tumor purity among other relevant data points. The data set also includes copy-number segment...

Subject

Adenocarcinoma

Adenocarcinoma of Lung

Adenocarcinoma, Mucinous

Breast Neoplasms

Carcinoma, Ductal, Breast

Carcinoma, Hepatocellular

Carcinoma, Lobular

Carcinoma, Non-Small-Cell Lung

Carcinoma, Renal Cell

Carcinoma, Squamous Cell

Carcinosarcoma

Cholangiocarcinoma

Colonic Neoplasms

Colorectal Neoplasms

Cystadenocarcinoma, Serous

DNA Mutational Analysis

Gallbladder Neoplasms

Glioblastoma

Liposarcoma

Lung Neoplasms

Lymphoma, Follicular

Melanoma

Mesothelioma

Neoplasms, Squamous Cell

Neurofibroma

Oligodendroglioma

Osteosarcoma

Ovarian Neoplasms

Pancreatic Neoplasms

Prostatic Neoplasms

Rectal Neoplasms

Sarcoma

Sarcoma, Synovial

Squamous Cell Carcinoma of Head and Neck

Stomach Neoplasms

Thyroid Cancer, Papillary

Urinary Bladder Neoplasms

Uterine Neoplasms

Uveal Neoplasms

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