Description from Figshare: "Supplementary data files for a study investigating the associations between medication, microbiome and mortality in cancer patients." Abstract from Figshare: "Discerning the effect of pharmacological exposures on intestinal bacterial communities in cancer patients is challenging. Here, we deconvoluted the relationship between drug exposures and changes in microbial...

Description from GitHub: "This repository contains R scripts to reproduce the five figures in Chi et al., "High resolution analyses of associations between medications, microbiome and mortality in cancer patients". R folder contains the key script for PARADIGM algorithm. RMD folder contains the scripts to produce Figures 1-5 in the paper."

Description from GitHub: "This repository contains all the code and files needed for our scientific data project that highlights comparative and functional study using 395 shotgun metagenomic samples from hematopoietic cell transplant patients collected in the past 10 years in Memorial Hospital. We also demonstrate functional study of those data such as antibiotic resistance genes."