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Experiment summary for ENCSR857MYS
- Authors
- Hardison, Ross C.
- Description
Description from ENCODE: "PSU mouse E14Tg2a.4 H3K9me3 ChIP-seq of H3K9me3" Title from the GEO: "Histone ChIP-seq from E14TG2a.4 (ENCSR857MYS)" Sequencing data from Mus musculus 129 E14TG2a.4 cell lines and their isogenic replicates targeting H3K9me3 is available to download and view. The interactive tools display connections between sequenced data. Further information on the datasets can be found...
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Chromatin Immunoprecipitation SequencingMice
- Access Rights
- Free to All
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Highly multiplexed spatially resolved gene expression profiling of mouse organogenesis
- Authors
- Ghazanfar, ShilaMarioni, John
- Description
Abstract from repository: "Transcriptional and epigenetic profiling of single-cells has advanced our knowledge of the molecular bases of gastrulation and early organogenesis. However, current approaches rely on dissociating cells from tissues, thereby losing the crucial spatial context that is necessary for understanding cell and tissue interactions during development. Here, we apply an image-based...
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Gene Expression ProfilingMiceOrganogenesisRNA, MessengerSingle-Cell Gene Expression AnalysisTranscriptome
- Access Rights
- Free to All
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SpatialMouseAtlas2020
- Authors
- Ghazanfar, ShilaMarioni, John
- Description
Description from GitHub: "Data processing and analysis scripts for our spatial profiling of mouse embryos using seqFISH as described in 'Integration of spatial and single-cell transcriptomic data elucidates mouse organogenesis'."
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Data AnalysisElectronic Data ProcessingMiceOrganogenesisSoftwareTranscriptome
- Access Rights
- Free to All