Search Tips
of 1 Next >
Results Found: 5
  • Neuroendocrine Prostate Cancer (Multi-Institute, Nat Med 2016): Whole exome sequencing of 114 metastatic tumor/normal pairs to understand genomic overlap between castration resistant adenocarcinoma (CRPC-Adeno) and neuroendocrine histologies (CRPC-NE).

    Description

    This dataset contains the summary data visualizations and clinical data from whole exome sequencing of 114 metastatic tumor/normal pairs from 81 patients. Clinical data includes: Cancer Type, Number of Samples Per Patient, Mutation Count, Fraction Genome Altered, CLONET Purity, Control Site, Disease code, Genomic Burden, Oncotree Code, Other Sample ID, Pathology Classification, Ploidy, Tumor Disease...

    Subject
    Carcinoma, Neuroendocrine
    Prostatic Neoplasms
    Prostatic Neoplasms, Castration-Resistant
    Access Rights
    Free to All
  • Minor intron splicing efficiency increases with the development of lethal prostate cancer

    Authors
    Heller, Manfred
    Rubin, Mark A.
    Description

    Description from PRIDE: "Minor intron-containing genes (MIGs) are crucial cell cycle regulators and are essential for cell survival. Thus, we explored whether MIGs play a role in cancer progression and cancer therapy resistance. Here we show that MIG-expression segregates sensitive and resistant prostate cancer cells from each other and them from benign tissue. Moreover, the rate of minor intron...

    Subject
    Introns/genetics
    Mass spectrometry
    Prostatic Neoplasms, Castration-Resistant
    Proteomics
    Access Rights
    Free to All
  • scRNAseq data of scrambled and siRNA-mediated knock-down of the minor spliceosome snRNA U6atac

    Description

    Description from EGA: "scRNAseq data of scrambled and siRNA-mediated knock-down (96h) of the minor spliceosome snRNA U6atac in androgen-sensitive LNCaP cells and in patient derived neuroendocrine organoids (PM154). Three replicates for each cell line."

    Subject
    Cell Line, Tumor
    Prostatic Neoplasms, Castration-Resistant
    Single-Cell Gene Expression Analysis
    Spliceosomes
    Access Rights
    Application Required
  • Bulk RNAseq data of scrambled and siRNA-mediated knock-down of the minor spliceosome snRNA U6atac

    Description

    Description from EGA: "Bulk RNAseq data of scrambled and siRNA-mediated knock-down of the minor spliceosome snRNA U6atac in androgen-sensitive LNCaP cells (L), androgen-insensitive C4-2 (C) and 22Rv1 (R) cells and in patient derived neuroendocrine organoids PM154 (P)."

    Subject
    Cell Line, Tumor
    Prostatic Neoplasms, Castration-Resistant
    RNA-Seq
    Spliceosomes
    Access Rights
    Application Required
  • Minor intron splicing is critical for survival of lethal prostate cancer (raw images)

    Authors
    Rubin, Mark A.
    Description

    Description from Mendeley Data: "Men with androgen receptor-negative castration-resistant prostate cancer (ARN CRPC) do not benefit from androgen receptor-directed therapies, face low survival rates, and have few alternative therapeutic options. Addressing this unmet clinical need requires new approaches to identify this more aggressive form of disease early on and to treat it effectively. A recent...

    Subject
    Introns/genetics
    Prostatic Neoplasms, Castration-Resistant
    Receptors, Androgen
    RNAi Therapeutics
    Spliceosomes
    Access Rights
    Free to All