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Protein folding stress potentiates NLRP1 and CARD8 inflammasome activation
- Authors
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Huang, Hsin-CheOrth-He, Elizabeth L.Bachovchin, Daniel
- Description
Summary from GEO: "We report the application of RNA-seq for profiling gene transcription upon treatment of methyl bestatin (MeBs, aminopeptidase inhibitor) or brefeldin A (BFA, ER-to-Golgi transport inhibitor), compared to DMSO control. We found MeBs and BFA similarly upregulated genes pertinent to proteotoxic stress." Overall design from GEO: "Examination of gene transcription levels upon treatment...
- Subject
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Gene Knockout TechniquesInflammasomesProtein FoldingProteotoxic Stress
- Access Rights
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Free to All
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Oxidized thioredoxin-1 restrains the NLRP1 inflammasome [NTERT-1]
- Authors
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Ball, DanielBachovchin, Daniel
- Description
Summary from GEO: "The danger signals that activate the NLRP1 inflammasome have yet to be firmly established. NLRP1 undergoes autoproteolysis to generate N-terminal (NT) and C-terminal (CT) fragment, which importantly, is a necessary step for its check-point regulation by the DPP9 ternary complex and the mechanistic activation of NLRP1 through functional degradation. Here, we report an added layer...
- Subject
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Gene ExpressionInflammasomesProtein FoldingRNA-SeqThioredoxins
- Access Rights
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Free to All
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Oxidized thioredoxin-1 restrains the NLRP1 inflammasome [mBMDM]
- Authors
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Ball, DanielBachovchin, Daniel
- Description
Summary from GEO: "The danger signals that activate the NLRP1 inflammasome have yet to be firmly established. NLRP1 undergoes autoproteolysis to generate N-terminal (NT) and C-terminal (CT) fragment, which importantly, is a necessary step for its check-point regulation by the DPP9 ternary complex and the mechanistic activation of NLRP1 through functional degradation. Here, we report an added layer...
- Subject
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Gene ExpressionInflammasomesProtein FoldingRNA-SeqThioredoxins
- Access Rights
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Free to All
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Cryo-EM 3D map of the Mycobacterium tuberculosis Hsp70 protein DnaK bound to the nucleotide exchange factor GrpE: EMD-29912
- Authors
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Xiao, XianshaLi, Huilin
- Description
Description from EMDB: "The molecular chaperone DnaK is essential for viability of Mycobacterium tuberculosis (Mtb). DnaK hydrolyzes ATP to fold substrates, and the resulting ADP is exchanged for ATP by the nucleotide exchange factor GrpE. It has been unclear how GrpE couples DnaK's nucleotide exchange with substrate release. Here we report a cryo-EM analysis of GrpE bound to an intact Mtb DnaK,...
- Subject
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Mycobacterium tuberculosisNucleotidesProtein Folding
- Access Rights
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Free to All
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Cryo-EM 3D map of the Mycobacterium tuberculosis Hsp70 protein DnaK bound to the nucleotide exchange factor GrpE: EMD-29913
- Authors
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Xiao, XianshaLi, Huilin
- Description
Description from EMDB: "The molecular chaperone DnaK is essential for viability of Mycobacterium tuberculosis (Mtb). DnaK hydrolyzes ATP to fold substrates, and the resulting ADP is exchanged for ATP by the nucleotide exchange factor GrpE. It has been unclear how GrpE couples DnaK's nucleotide exchange with substrate release. Here we report a cryo-EM analysis of GrpE bound to an intact Mtb DnaK,...
- Subject
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Mycobacterium tuberculosisNucleotidesProtein Folding
- Access Rights
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Free to All
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Cryo-EM 3D focused map of the Mycobacterium tuberculosis Hsp70 protein DnaK SBD domain: EMD-29914
- Authors
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Xiao, XianshaLi, Huilin
- Description
Description from EMDB: "The molecular chaperone DnaK is essential for viability of Mycobacterium tuberculosis (Mtb). DnaK hydrolyzes ATP to fold substrates, and the resulting ADP is exchanged for ATP by the nucleotide exchange factor GrpE. It has been unclear how GrpE couples DnaK's nucleotide exchange with substrate release. Here we report a cryo-EM analysis of GrpE bound to an intact Mtb DnaK,...
- Subject
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Mycobacterium tuberculosisNucleotidesProtein Folding
- Access Rights
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Free to All