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Analysis of transcriptomes in intestinal stem cells in response to Interferon gamma
- Authors
- Hanash, AlanTakashima, Shuichiro
- Description
Summary from GEO: "There is limited understanding of how immune-mediated damage impacts intestinal stem cells (ISCs). We found that stem cell compartment injury is a shared feature of both alloreactive and autoreactive intestinal immunopathology, reducing ISCs and impairing their recovery in T-cell-mediated injury models. Modeling with ex vivo epithelial cultures indicated ISC depletion and impaired...
- Subject
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Epithelial CellsMicroRNAsStem CellsT-LymphocytesTranscriptome
- Access Rights
- Free to All
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A lymphatic-stem cell interactome regulates intestinal stem cell activity
- Authors
- Niec, Rachel E.Chu, Tin YiGur-Cohen, ShiriSchernthanner, Marina2 more author(s)...
- Description
Summary from GEO: "Single-cell RNA-sequencing of murine small intestinal organoid cultured with and without lymphatic endothelial cells: Purpose: To identify differences in cell composition in murine organoids upon coculture with lymphatic endothelial cells Results: We recovered 818 cells with a median of 37750 UMIs per cell for the organoid alone and 1233 cells with a median of 79354 UMIs per cells...
- Subject
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Endothelial CellsIntestinal MucosaRNA-SeqSingle-Cell AnalysisStem CellsTranscriptome
- Access Rights
- Free to All