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Results Found: 5
  • SMYD5 regulates H4K20me3-marked heterochromatin to safeguard ES cell self-renewal and prevent spurious differentiation [ChIP-Seq]

    Authors
    Kidder, Benjamin L.
    Zhao, Keji
    Description

    Summary from the GEO:"Epigenetic regulation of chromatin states is thought to control the self-renewal and differentiation of embryonic stem (ES) cells. However, the roles of repressive histone modifications such as trimethylated histone lysine 20 (H4K20me3) in pluripotency and development are largely unknown. Here, we show that the histone lysine methyltransferase SMYD5 mediates H4K20me3 at heterochromatin...

    Subject
    Chromatin Immunoprecipitation Sequencing
    DNA Methylation
    Gene Silencing
    Histone Code
    Histone-Lysine N-Methyltransferase
    Methyltransferases
    RNA Interference
    Tumor Suppressor Proteins
    Access Rights
    Free to All
  • SMYD5 regulates H4K20me3-marked heterochromatin to safeguard ES cell self-renewal and prevent spurious differentiation [RNA-Seq]

    Authors
    Kidder, Benjamin L.
    Zhao, Keji
    Description

    Summary from the GEO: "Epigenetic regulation of chromatin states is thought to control the self-renewal and differentiation of embryonic stem (ES) cells. However, the roles of repressive histone modifications such as trimethylated histone lysine 20 (H4K20me3) in pluripotency and development are largely unknown. Here, we show that the histone lysine methyltransferase SMYD5 mediates H4K20me3 at heterochromatin...

    Subject
    Chromatin Immunoprecipitation Sequencing
    DNA Methylation
    Gene Silencing
    Histone Code
    Histone-Lysine N-Methyltransferase
    Methyltransferases
    RNA Interference
    Tumor Suppressor Proteins
    Access Rights
    Free to All
  • SMYD5 regulates H4K20me3-marked heterochromatin to safeguard ES cell self-renewal and prevent spurious differentiation

    Authors
    Kidder, Benjamin L.
    Description

    Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Summary: This SuperSeries is composed of the SubSeries GSE94033 and GSE94085. Article summary that correlates to the GEO: "Epigenetic regulation of chromatin states is thought to control the self-renewal and differentiation of embryonic stem (ES) cells. However, the roles of repressive...

    Subject
    Chromatin Immunoprecipitation Sequencing
    DNA Methylation
    Gene Silencing
    Histone Code
    Histone-Lysine N-Methyltransferase
    Methyltransferases
    RNA Interference
    Tumor Suppressor Proteins
    Access Rights
    Free to All
  • Frequent 4EBP1 amplification induces synthetic dependence on FGFR signaling in cancer

    Authors
    Mohan, Prathibha
    Pasion, Joyce
    Lailler, Nathalie
    de Stanchina, Elisa
    6 more author(s)...
    Description

    Summary from GEO: "The eIF4E translation initiation factor has oncogenic properties and concordantly, the inhibitory eIF4E-binding protein (4EBP1) is considered a tumor suppressor. The exact molecular effects of 4EBP1 activation in cancer are still unknown. Surprisingly, 4EBP1 is a target of genomic copy number gains (Chr. 8p11) in breast and lung cancer. We notice that 4EBP1 gains are genetically...

    Subject
    Doxycycline
    Eukaryotic Initiation Factor-4E
    MicroRNAs
    Ribosome Profiling
    Tumor Suppressor Proteins
    Access Rights
    Free to All
  • Modeling cancer-associated mutations reveals an integrated role for the Pol epsilon catalytic core in replisome assembly and DNA synthesis

    Authors
    Meng, Xiangzhou
    Zhao, Xiaolan
    Zhang, Tuo
    Xiang, Jenny
    Description

    Summary from GEO: "DNA polymerase epsilon (Pol epsilon) plays multiple roles in genome duplication and its catalytic subunit POLE suppresses tumorigenesis in humans. Despite its importance, we have limited understanding of Pol epsilon functional mechanisms and how its loss-of-function affects the evolution of cancer genomes. To address this issue, we used the budding yeast ortholog Pol2 to model...

    Subject
    Carcinogenesis
    Catalytic Domain
    DNA Polymerase II
    Tumor Suppressor Proteins
    Access Rights
    Free to All