Cholangiocarcinoma (National Cancer Centre of Singapore, Nat Genet 2013): Exome sequencing of 15 cholangiocarcinoma cases.

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UID: 10455

Description: This dataset contains summary data visualizations and clinical data from a sampling of 15 cholangiocarcinomas from 15 patients. gathered for a study by the National Cancer Centre of Singapore. The clinical data includes de-identified patient and tumor sample ID, mutation count, patient demographics, anatomical subtype, and anti_O_viverrini_IgG. The clinical data can be downloaded as a .tsv file.

Subject of Study

Subject(s)

OncoTree Cancer Type(s)

Extrahepatic Cholangiocarcinoma
Intrahepatic Cholangiocarcinoma

Access via cBioPortal
Access Restrictions: Free to All
Access Instructions: This cBioPortal for Cancer Genomics dataset is publicly available for viewing online as tables, graphs, and/or charts. The data is also available for download in its entirety as a tarball or as individual TSV (tab separated value) files. Some features are only available by logging in with a Google or Microsoft account. These feautes include storing your virtual studies and groups which allows you to access your studies and groups from any computer, and to allow cBioPortal to remember your study view charts preferences for each study (i.e. order of the charts, type of charts and visibility). Login is optional and not required to access any of the other features of cBioPortal.
Associated Publications: Chan-On W, Nairismägi ML, Ong CK, et al. Exome sequencing identifies distinct mutational patterns in liver fluke-related and non-infection-related bile duct cancers. Nat Genet. 2013;45(12):1474-1478. doi:10.1038/ng.2806
Data Type: Genomic
Dataset Format(s): Plain Text, TAR
Dataset Size: 137KB

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