Metastatic Esophagogastric Cancer (MSKCC, Cancer Discovery 2017): Targeted sequencing of 341 samples from 305 metastatic esophagogastric cancer patients
UID: 10637
Publisher(s): Memorial Sloan Kettering Cancer Center- Description
- This dataset contains the summary data visualizations and clinical data from targeted sequencing of 341 samples from 305 metastatic esophagogastric cancer patients. Clinical data includes: Cancer Type, Number of Samples Per Patient, Mutation Count, Fraction Genome Altered, Metastasis/Primary Sample Type, Sex, Race Category, Age at Diagnosis, Biopsy Obtained at MSK or OSH, Clinical Trial 1L, Clinical Trial 2L, Clinical Trial 3L, Details on First Line & Comments, EBV Tested, ECOG At Stage IV Diagnosis, EGC Overall Survival from start of IO to date of death/follow up/POD, FGA, Gene Panel, H-PYLORI. The plaintext components of the dataset can be downloaded as a tar file. The clinical data can be downloaded as a tsv file. The dataset includes copy-number segment data downloadable as .seg files and viewable via the Integrative Genomics Viewer.
Adenocarcinoma of the Gastroesophageal Junction
Stomach Adenocarcinoma
- Access Restrictions
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Free to All
- Access Instructions
- This cBioPortal for Cancer Genomics dataset is publicly available for viewing in tables or, for copy-number segments, via integrated IGV application. The data is also available for download in its entirety as a tarball or as individual TSV (tab separated value) or SEG files. Some features are only available by logging in with a Google or Microsoft account. These features include storing your virtual studies and groups which allows you to access your studies and groups from any computer, and to allow cBioPortal to remember your study view charts preferences for each study (i.e. order of the charts, type of charts and visibility). Login is optional and not required to access any of the other features of cBioPortal.
- Associated Publications
- Data Type
- Software Used
- Dataset Format(s)
- TSV, TAR, SEG
- Data Tool(s)
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MSK-IMPACT
- Dataset Size
- 534 KB (TAR), 148 TSV, 1 MB (SEG)
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