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Esophageal Adenocarcinoma (TCGA, PanCancer Atlas)
- Description
This dataset contains summary data visualizations and clinical data from a broad sampling of 182 esophageal adenocarcinomas from 182 patients. The data was gathered as part of the PanCancer Atlas initiative, which aims to answer big, overarching questions about cancer by examining the full set of tumors characterized in the robust TCGA dataset. The clinical data includes mutation count, information...
- Subject
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AdenocarcinomaDNA Mutational AnalysisEsophageal Neoplasms
- Access Rights
- Free to All
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Stomach Adenocarcinoma (TCGA, PanCancer Atlas)
- Description
This dataset contains summary data visualizations and clinical data from a broad sampling of 440 stomach adenocarcinomas from 440 patients. The data was gathered as part of the PanCancer Atlas initiative, which aims to answer big, overarching questions about cancer by examining the full set of tumors characterized in the robust TCGA dataset. The clinical data includes mutation count, information about...
- Subject
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AdenocarcinomaDNA Mutational AnalysisEsophageal NeoplasmsStomach Neoplasms
- Access Rights
- Free to All
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Prostate Adenocarcinoma (TCGA, PanCancer Atlas)
- Description
This dataset contains summary data visualizations and clinical data from a broad sampling of 494 prostate adenocarcinomas from 494 patients. The data was gathered as part of the PanCancer Atlas initiative, which aims to answer big, overarching questions about cancer by examining the full set of tumors characterized in the robust TCGA dataset. The clinical data includes mutation count, information...
- Subject
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AdenocarcinomaDNA Mutational AnalysisProstatic Neoplasms
- Access Rights
- Free to All
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Pancreatic Adenocarcinoma (TCGA, PanCancer Atlas)
- Description
This dataset contains summary data visualizations and clinical data from a broad sampling of 184 pancreatic adenocarcinomas and patients. The data was gathered as part of the PanCancer Atlas initiative, which aims to answer big, overarching questions about cancer by examining the full set of tumors characterized in the robust TCGA dataset. The clinical data includes mutation count, information about...
- Subject
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AdenocarcinomaDNA Mutational AnalysisPancreatic Neoplasms
- Access Rights
- Free to All
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MSK-IMPACT Clinical Sequencing Cohort (MSKCC, Nat Med 2017): Targeted sequencing of 10,000 clinical cases using the MSK-IMPACT assay
- Description
This dataset contains summary data visualizations and clinical data from the targeted sequencing of 10,000 clinical cases using the MSK-IMPACT assay. The clinical data includes mutation count, information about mutated genes, tumor mutational burden calculations, tissue site from which the sample was derived, tumor purity among other relevant data points. The data set also includes copy-number segment...
- Subject
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AdenocarcinomaAdenocarcinoma of LungAdenocarcinoma, MucinousBreast NeoplasmsCarcinoma, Ductal, BreastCarcinoma, HepatocellularCarcinoma, LobularCarcinoma, Non-Small-Cell LungCarcinoma, Renal CellCarcinoma, Squamous CellCarcinosarcomaCholangiocarcinomaColonic NeoplasmsColorectal NeoplasmsCystadenocarcinoma, SerousDNA Mutational AnalysisGallbladder NeoplasmsGlioblastomaLiposarcomaLung NeoplasmsLymphoma, FollicularMelanomaMesotheliomaNeoplasms, Squamous CellNeurofibromaOligodendrogliomaOsteosarcomaOvarian NeoplasmsPancreatic NeoplasmsProstatic NeoplasmsRectal NeoplasmsSarcomaSarcoma, SynovialSquamous Cell Carcinoma of Head and NeckStomach NeoplasmsThyroid Cancer, PapillaryUrinary Bladder NeoplasmsUterine NeoplasmsUveal Neoplasms
- Access Rights
- Free to All
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NCI-60 Cell Lines (NCI, Cancer Res 2012): Whole-exome sequencing of 67 samples by NCI-60 cell line project
- Description
This dataset contains summary data visualizations and clinical data from 67 samples from 67 patients as part an NCI-60 cell line project to compile NCI-60 cell line high-throughput and high-content data into CellMiner, a genomic and pharmacologic database created by the National Cancer Center Institute. The clinical data includes deidentified patient and sample IDs, mutation counts, detailed cancer...
- Subject
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AdenocarcinomaBrain NeoplasmsBreast NeoplasmsCarcinoma, Renal CellColorectal NeoplasmsDNA Mutational AnalysisLeukemia, MyeloidLung NeoplasmsMelanomaOvarian NeoplasmsProstatic Neoplasms
- Access Rights
- Free to All
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Prostate Adenocarcinoma (MSK, Eur Urol 2020): Targeted sequencing of 1465 prostate adenocarcinoma tumor/normal pairs via MSK-IMPACT.
- Description
This dataset contains summary data visualizations and clinical data from a broad sampling of prostate adenocarcinomas. The data was gathered utilizing the MSK-IMPACT targeted sequencing test. The clinical data includes tumor type (based on the opensource OncoTree ontology developed at MSK), mutation count, information about mutated genes, patient demographics, tumor sample details, Impact TMB Score,...
- Subject
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AdenocarcinomaDNA Mutational AnalysisProstatic Neoplasms
- Access Rights
- Free to All
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Esophageal Carcinoma (TCGA, Firehose Legacy)
- Description
This dataset contains summary data visualizations and clinical data from a broad sampling of 182 esophageal adenocarcinomas. TCGA Esophageal Carcinoma . Source data from GDAC Firehose. Previously known as TCGA Provisional. The data was gathered as part of the Broad Institute of MIT and Harvard Firehose initiative, a cancer analysis pipeline. his dataset contains summary data visualizations and clinical...
- Subject
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AdenocarcinomaCarcinoma, Squamous CellDNA Mutational AnalysisEsophageal NeoplasmsNeoplasms, Squamous CellStomach Neoplasms
- Access Rights
- Free to All
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Stomach Adenocarcinoma (TCGA, Firehose Legacy)
- Description
TCGA Stomach Adenocarcinoma. Source data from GDAC Firehose. Previously known as TCGA Provisional. This dataset contains summary data visualizations and clinical data from a broad sampling of 478 carcinomas from 478 patients. The data was gathered as part of the Broad Institute of MIT and Harvard Firehose initiative, a cancer analysis pipeline. The clinical data includes mutation count, information...
- Subject
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AdenocarcinomaAdenocarcinoma, PapillaryDNA Mutational AnalysisStomach Neoplasms
- Access Rights
- Free to All
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Colorectal Adenocaranoma (TCGA, Firehose Legacy)
- Description
TCGA Colorectal Adenocarcinoma. Source data from GDAC Firehose. Previously known as TCGA Provisional. This dataset contains summary data visualizations and clinical data from a broad sampling of 640 carcinomas from 636 patients. The data was gathered as part of the Broad Institute of MIT and Harvard Firehose initiative, a cancer analysis pipeline. The clinical data includes mutation count, information...
- Subject
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AdenocarcinomaColorectal NeoplasmsDNA Mutational Analysis
- Access Rights
- Free to All