-
Cholangiocarcinoma (TCGA, PanCancer Atlas) data
- Description
This dataset contains summary data visualizations and clinical data from a broad sampling of 36 cholangiocarcinomas from 36 patients. The data was gathered as part of the PanCancer Atlas initiative, which aims to answer big, overarching questions about cancer by examining the full set of tumors characterized in the robust TCGA dataset. The clinical data includes mutation count, information about mutated...
- Subject
-
CholangiocarcinomaDNA Mutational Analysis
- Access Rights
- Free to All
-
Cholangiocarcinoma (MSK, Clin Cancer Res 2018): Targeted sequencing (MSK-IMPACT) of 195 tumor samples (194 with matched normals) from 192 cholangiocarcinoma patients.
- Description
This dataset contains summary data visualizations and clinical data from a broad sampling of 195 cholangiocarcinomas from 192 patients. The data was gathered utilizing the MSK-IMPACT targeted sequencing test. The clinical data includes tumor type (based on the opensource OncoTree ontology developed at MSK), mutation count, information about mutated genes, patient demographics, and disease status....
- Subject
-
CholangiocarcinomaDNA Mutational Analysis
- Access Rights
- Free to All
-
SUMMIT - Neratinib Basket Study (Multi-Institute, Nature 2018): MSK-IMPACT sequencing of 86 patients with HER2- and HER3-mutant cancers
- Description
This dataset contains summary data visualizations and clinical data from a broad sampling of HER2- and HER3-mutant tumors. The data was generated utilizing the MSK-IMPACT targeted sequencing test. The clinical data includes tumor type (based on the opensource OncoTree ontology developed at MSK), mutation count, information about mutated genes, Amplification Status, Best objective response rate, Bubble...
- Subject
-
Breast NeoplasmsCarcinoma, HepatocellularCarcinoma, Non-Small-Cell LungCarcinoma, Renal CellColorectal NeoplasmsDNA Mutational AnalysisEndometrial NeoplasmsEsophageal NeoplasmsGenes, erbBGenes, erbB-2MelanomaOvarian NeoplasmsPancreatic NeoplasmsSalivary Gland NeoplasmsSarcomaSkin NeoplasmsUrinary Bladder NeoplasmsUterine Cervical Neoplasms
- Access Rights
- Free to All
-
Tumors with TRK fusions (MSK, 2019): Tumors with TRK fusions based on MSK-IMPACT targeted sequencing.
- Description
This dataset contains summary data visualizations and clinical data from a broad sampling of tropomyosin receptor kinase (TRK) fusion tumors. The data was gathered utilizing the MSK-IMPACT targeted sequencing test. The clinical data includes tumor type (based on the opensource OncoTree ontology developed at MSK), information about mutated genes, patient demographics, and modality. The data set also...
- Subject
-
DNA Mutational AnalysisOncogene Proteins, FusionReceptor Protein-Tyrosine KinasesReceptor, trkAReceptor, trkBReceptor, trkC
- Access Rights
- Free to All
-
Cholangiocarcinoma (National Cancer Centre of Singapore, Nat Genet 2013): Exome sequencing of 15 cholangiocarcinoma cases.
- Description
This dataset contains summary data visualizations and clinical data from a sampling of 15 cholangiocarcinomas from 15 patients. gathered for a study by the National Cancer Centre of Singapore. The clinical data includes de-identified patient and tumor sample ID, mutation count, patient demographics, anatomical subtype, and anti_O_viverrini_IgG. The clinical data can be downloaded as a .tsv file.
- Subject
-
CholangiocarcinomaDNA Mutational Analysis
- Access Rights
- Free to All
-
Cholangiocarcinoma (TCGA, Firehose Legacy)
- Description
TCGA Cholangiocarcinoma. Source data from GDAC Firehose. Previously known as TCGA Provisional. This dataset contains summary data visualizations and clinical data from a broad sampling of 51 cholangiocarcinomas from 51 patients. The data was gathered as part of the Broad Institute of MIT and Harvard Firehose initiative, a cancer analysis pipeline. The clinical data includes mutation count, information...
- Subject
-
CholangiocarcinomaDNA Mutational Analysis
- Access Rights
- Free to All
-
Intrahepatic Cholangiocarcinoma (MSK, Hepatology 2021): Targeted sequencing of 412 intrahepatic cholangiocarcinoma tumor/normal sample pairs.
- Description
This dataset contains summary data visualizations and clinical data from a broad sampling of 412 intrahepatic cholangiocarcinomas from 412 patients. The clinical data includes mutation count, information about mutated genes, patient demographics, adjuvant chemotherapy, patient BMI, Duct Type, DZ Extent, CA19, CA19 High, and presence of chronic viral hepatitis, cirrhosis, diabetes, ECOG BIN, HAIC,...
- Subject
-
CholangiocarcinomaDNA Mutational AnalysisLiver Neoplasms
- Access Rights
- Free to All
-
Intrahepatic Cholangiocarcinoma: Targeted sequencing of IMPACT and CMO samples
- Description
This dataset contains summary data visualizations and clinical data from a sampling of 219 intrahepatic cholangiocarcinomas from 219 patients. The clinical data includes mutation count, presence of an Archer Panel, MSK IMPACT TMB Percentiles across & within tumor types, Metastatic Sites and the availability of MSK Pathology slide, Mutation Count, Age at Which Sequencing was Reported, Archer Panel,...
- Subject
-
AdenocarcinomaCholangiocarcinomaDNA Mutational AnalysisLiver Neoplasms
- Access Rights
- Free to All