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Bladder Cancer (MSKCC, Nat Genet 2016): Whole exome and targeted sequencing of 34 plasmacytoid-variant (signet ring cell) tumors of the bladder
- Authors
- Al-Ahmadie, HikmatIyer, Gopakumar VasudevaLee, Byron Hing LungScott, Sasinya Neka25 more author(s)...
- Description
Whole-exome and targeted sequencing of plasmacytoid bladder cancer, an aggressive histologic variant with a high risk of disease-specific mortality. This dataset contains summary data visualizations and sequencing data of 34 plasmacytoid-variant (signet ring cell) tumors of the bladder from 31 patients. Clinical data includes detailed cancer type, mutation count, information about mutated genes, patient...
- Subject
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DNA Mutational AnalysisPlasmacytoma/geneticsUrinary Bladder Neoplasms
- Access Rights
- Free to All
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Whole Exome Sequencing of Six Signet Ring/Plasmacytoid Variant Bladder Tumors
- Authors
- Solit, David
- Description
In this study, six plasmacytoid bladder cancers were analyzed by whole exome sequencing. The results show loss of the CDH1 gene in every sample and correlate with E-cadherin loss of expression by immunohistochemistry. A separate validation cohort of plasmacytoid samples showed loss of E-cadherin expression by CDH1 mutation or promoter hypermethylation. The data includes information about the study,...
- Subject
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DNA Mutational AnalysisMutationPlasmacytoma/geneticsUrinary Bladder Neoplasms
- Access Rights
- Application Required
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TMB and Immunotherapy (MSKCC, Nat Genet 2019): Genomic and survival data from 1661 tumor-normal pairs from 1661 patients with various cancer types sequenced with the MSK-IMPACT assay.
- Description
This dataset contains summary data visualizations and clinical data from a broad sampling of 1,661 samples of across multiple cancer types showing tumor mutational load and survival following immunotherapy from 1,661 patients. The data was gathered utilizing the MSK-IMPACT targeted sequencing test. The clinical data includes tumor type (based on the opensource OncoTree ontology developed at MSK),...
- Subject
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DNA Mutational AnalysisImmunotherapyMutationTumor Burden
- Access Rights
- Free to All