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Results Found: 3
  • Integrated epigenomic and transcriptomic profiling of terminal human erythropoiesis [RNA-seq]

    Authors
    Ludwig, Leif S.
    Lareau, Caleb A.
    Description

    Summary from GEO: "In vitro cultured CD34+ derived erythroblasts were sorted using surface markers and processed using RNA-seq." Overall design "Biological replicates (3 or 4 per population) were processed across 2-3 biological donors for 8 sorted populations for RNA-seq."

    Subject
    Antigens, CD34
    Erythroblasts
    Erythropoiesis
    RNA-Seq
    Access Rights
    Free to All
  • Integrated epigenomic and transcriptomic profiling of terminal human erythropoiesis [ATAC-seq]

    Authors
    Ludwig, Leif S.
    Lareau, Caleb A.
    Description

    Summary from GEO: "In vitro cultured CD34+ derived erythroblasts were sorted using surface markers and processed using ATAC-seq." Overall design from GEO: "Biological replicates (3 or 4 per population) were processed across 2-3 biological donors for 8 sorted populations for ATAC-seq."

    Subject
    Antigens, CD34
    Chromatin Immunoprecipitation Sequencing
    Erythroblasts
    Erythropoiesis
    Access Rights
    Free to All
  • RNA-seq of MUTZ3 cells in experiments to investigate EVI1 regulation

    Authors
    Delwel, Ruud
    Description

    Description from EMBL-EBI: "We investigated whether GATA2 enhancer-driven transcription of EVI1 in inv(3)/t(3;3) is reversible in leukemia cells. In primary inv(3)/t(3;3) AML, immature CD34+CD15- cells can be discriminated from more mature CD34-CD15- and CD34-CD15+ cells. Besides, we also investigated the effect of deleting a MYB binding site on these cells using CRISPR/Cas9." Detailed sample and...

    Subject
    Antigens, CD34
    CRISPR-Cas Systems
    Genes, myb
    Leukemia
    RNA-Seq
    Access Rights
    Free to All