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  • Growth factor-mediated coupling between lineage size and cell fate choice underlies robustness of mammalian development: Code for phase-plane analysis and modeling

    Authors
    Arenales, Nestor Saiz
    Bitria, Laura Mora
    Rahman, Shahadat
    George, Hannah
    3 more author(s)...
    Description

    Description from GitHub: "This repository contains the code to reproduce the modeling figures of the paper by Saiz et al, published in eLife 2020;9:e56079 (doi: 10.7554/eLife.56079) and posted in bioRxiv (preprint 2019.12.27.889006). It includes the following: fig2b.ipynb: self-contained Jupyter notebook to generate the phase portrait shown in Figure 2b. fig2c.ipynb: Jupyter notebook to generate...

    Subject
    Cell Lineage
    Computer Simulation
    Data Analysis
    Embryo, Mammalian
    Access Rights
    Free to All
  • Growth factor-mediated coupling between lineage size and cell fate choice underlies robustness of mammalian development: Processed data and code

    Authors
    Arenales, Nestor Saiz
    Description

    Description from GitHub: "This repository contains the data and code associated with the article by Saiz et al., Growth factor-mediated coupling between lineage size and cell fate choice underlies robustness of mammalian development, eLife 2020;9:e56079, DOI:10.7554/eLife/56079. The repository tries to follow a standard structure, mostly based on the Cookiecutter Data Science project and other...

    Subject
    Cell Lineage
    Computer Simulation
    Data Analysis
    Electronic Data Processing
    Embryo, Mammalian
    Access Rights
    Free to All
  • Raw data for Growth factor-mediated coupling between lineage size and cell fate choice underlies robustness of mammalian development

    Authors
    Arenales, Nestor Saiz
    Bitria, Laura Mora
    Rahman, Shahadat
    George, Hannah
    3 more author(s)...
    Description

    Description from Figshare: "This dataset contains the raw image stacks, segmentation and tables for the data used in the article Growth factor-mediated coupling between lineage size and cell fate choice underlies robustness of mammalian development, by Saiz et al., (2020). Elife. 2020;9:e56079. doi:10.7554/eLife.56079" Data collection includes 34 separate datasets linked on main collection page,...

    Subject
    Cell Lineage
    Chimera
    Embryo, Mammalian
    Microscopy, Confocal
    Access Rights
    Free to All