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Results Found: 7
  • A Congenital Anemia Dissociates the Pleiotropic Functions of Master Transcription Factor GATA1 [G1E_ChIPseq]

    Authors
    Ludwig, Leif S.
    Lareau, Caleb A.
    Description

    Summary from GEO: "Master regulators, such as the hematopoietic transcription factor GATA1, have numerous roles in lineage commitment and differentiation. While human GATA1 mutations result in several blood diseases, all characterized mutations act relatively early to impair hematopoietic differentiation. Here, we describe a distinct form of hemolytic anemia involving impaired terminal erythropoiesis...

    Subject
    Anemia, Hemolytic, Congenital
    Chromatin Immunoprecipitation Sequencing
    Erythropoiesis
    GATA1 Transcription Factor
    Access Rights
    Free to All
  • A Congenital Anemia Dissociates the Pleiotropic Functions of Master Transcription Factor GATA1 [G1E_RNAseq]

    Authors
    Ludwig, Leif S.
    Lareau, Caleb A.
    Sankaran, Vijay
    Description

    Summary from GEO: "Master regulators, such as the hematopoietic transcription factor GATA1, have numerous roles in lineage commitment and differentiation. While human GATA1 mutations result in several blood diseases, all characterized mutations act relatively early to impair hematopoietic differentiation. Here, we describe a distinct form of hemolytic anemia involving impaired terminal erythropoiesis...

    Subject
    Anemia, Hemolytic, Congenital
    Erythropoiesis
    GATA1 Transcription Factor
    Sequence Analysis, RNA
    Access Rights
    Free to All
  • A Congenital Anemia Dissociates the Pleiotropic Functions of Master Transcription Factor GATA1 [G1E_ATACseq]

    Authors
    Ludwig, Leif S.
    Lareau, Caleb A.
    Description

    Summary from GEO: "Master regulators, such as the hematopoietic transcription factor GATA1, have numerous roles in lineage commitment and differentiation. While human GATA1 mutations result in several blood diseases, all characterized mutations act relatively early to impair hematopoietic differentiation. Here, we describe a distinct form of hemolytic anemia involving impaired terminal erythropoiesis...

    Subject
    Anemia, Hemolytic, Congenital
    Chromatin Immunoprecipitation Sequencing
    Erythropoiesis
    GATA1 Transcription Factor
  • Physiologic expression of Sf3b1K700E causes impaired erythropoieses, aberrant splicing, and sensitivity to pharmacologic spliceosome modulation

    Authors
    Seiler, Michael
    Obeng, Esther A.
    Description

    Summary from GEO: "Over 80% of patients with the refractory anemia with ring sideroblasts subtype of myelodysplastic syndrome (MDS) have mutations in Splicing Factor 3B, Subunit 1 (SF3B1). We generated a conditional knock-in mouse model of the most common SF3B1 mutation, Sf3b1K700E. Sf3b1K700E mice develop macrocytic anemia due to a terminal erythroid maturation defect, erythroid dysplasia, and...

    Subject
    Anemia, Macrocytic
    Anemia, Refractory
    Erythropoiesis
    Gene Expression Profiling
    Myelodysplastic Syndromes
    Spliceosomes
    Access Rights
    Free to All
  • Integrated epigenomic and transcriptomic profiling of terminal human erythropoiesis [ATAC-seq]

    Authors
    Ludwig, Leif S.
    Lareau, Caleb A.
    Description

    Summary from GEO: "In vitro cultured CD34+ derived erythroblasts were sorted using surface markers and processed using ATAC-seq." Overall design from GEO: "Biological replicates (3 or 4 per population) were processed across 2-3 biological donors for 8 sorted populations for ATAC-seq."

    Subject
    Antigens, CD34
    Chromatin Immunoprecipitation Sequencing
    Erythroblasts
    Erythropoiesis
    Access Rights
    Free to All
  • Integrated epigenomic and transcriptomic profiling of terminal human erythropoiesis [RNA-seq]

    Authors
    Ludwig, Leif S.
    Lareau, Caleb A.
    Description

    Summary from GEO: "In vitro cultured CD34+ derived erythroblasts were sorted using surface markers and processed using RNA-seq." Overall design "Biological replicates (3 or 4 per population) were processed across 2-3 biological donors for 8 sorted populations for RNA-seq."

    Subject
    Antigens, CD34
    Erythroblasts
    Erythropoiesis
    RNA-Seq
    Access Rights
    Free to All
  • A Cdx4-Sall4 regulatory module controls the transition from mesoderm formation to embryonic hematopoiesis

    Authors
    Paik, Elizabeth J.
    Mahony, Shaun
    White, Richard Mark
    Price, Emily N.
    6 more author(s)...
    Description

    Description from Harvard Dataverse: "Deletion of caudal/cdx genes alters hox gene expression and causes defects in posterior tissues and hematopoiesis. Yet, the defects in hox gene expression only partially explain these phenotypes. To gain deeper insight into Cdx4 function, we performed ChIP-seq combined with gene expression profiling in zebrafish, and identified the transcription factor spalt-like...

    Subject
    Chromatin Immunoprecipitation Sequencing
    Erythropoiesis
    Gene Expression Profiling
    Gene Knockdown Techniques
    Hematopoiesis
    Access Rights
    Free to All