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Transcriptional regulation of adaptive NK and CD8 T cell responses [RNA-Seq]
- Alternate Title(s)
- Regulation of natural killer cells during MCMV infection
- Authors
- Lau, Colleen M.Sun, Joseph C.
- Description
Natural killer (NK) cells are innate lymphocytes that possess features of adaptive immunity such as clonal expansion and generation of long-lived memory. Here we look at transcriptional profiles of NK cells throughout several time points during MCMV infection, ex-vivo cytokine stimulation, and/or deficiency of key transcription factors such as STAT4, STAT1, and Runx1. In addition, we profile parallel...
- Subject
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Killer Cells, NaturalMouse CytomegalovirusT-Lymphocytes, CytotoxicTranscription FactorsViral Infections
- Access Rights
- Free to All
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Transcription factor IRF8 orchestrates the adaptive natural killer cell response
- Authors
- Lau, Colleen M.Sun, Joseph C.
- Description
RNA-seq performed on NK cells harvested during in-vivo infection. Natural killer (NK) cells are innate lymphocytes that have been recently appreciated to display features of adaptive immunity in response to viral infection. Biallelic mutations in the IRF8 gene have been reported to cause familial NK cell deficiency and susceptibility to severe viral infection in humans; however, the precise role...
- Subject
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Interferon Regulatory FactorsKiller Cells, NaturalMouse CytomegalovirusViral Infections
- Access Rights
- Free to All
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STAT4 promotes Bhlhe40 induction to drive protective IFN-g from natural killer cells during viral infection [STAT4 CUT&RUN]
- Authors
- Kim, HyunuSun, Joseph C.
- Description
Summary from GEO: "NK cells represent a cellular component of the mammalian innate immune system, and mount rapid responses against viral infection, including the secretion of the potent anti-viral effector cytokine IFN-g. Following mouse cytomegalovirus (MCMV) infection, Bhlhe40 was the most highly induced transcription factor in NK cells among the basic helix-loop-helix family. Bhlhe40 upregulation...
- Subject
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Basic Helix-Loop-Helix Transcription FactorsBinding sitesChromatin Immunoprecipitation SequencingInterferon-gammaInterleukin-12Interleukin-18Killer Cells, NaturalMouse CytomegalovirusSTAT4 Transcription Factor
- Access Rights
- Free to All
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STAT4 promotes Bhlhe40 induction to drive protective IFN-g from natural killer cells during viral infection [IL18R1KO RNA-seq]
- Authors
- Sheppard, SamLau, Colleen M.Kim, HyunuSun, Joseph C.
- Description
Summary from GEO: "NK cells represent a cellular component of the mammalian innate immune system, and mount rapid responses against viral infection, including the secretion of the potent anti-viral effector cytokine IFN-g. Following mouse cytomegalovirus (MCMV) infection, Bhlhe40 was the most highly induced transcription factor in NK cells among the basic helix-loop-helix family. Bhlhe40 upregulation...
- Subject
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Basic Helix-Loop-Helix Transcription FactorsInterferon-gammaInterleukin-12Interleukin-18Killer Cells, NaturalMouse CytomegalovirusRNA-SeqSTAT4 Transcription Factor
- Access Rights
- Free to All
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STAT4 promotes Bhlhe40 induction to drive protective IFN-g from natural killer cells during viral infection [BHLHE40 CUT&RUN]
- Authors
- Kim, HyunuSun, Joseph C.
- Description
Summary from GEO: "NK cells represent a cellular component of the mammalian innate immune system, and mount rapid responses against viral infection, including the secretion of the potent anti-viral effector cytokine IFN-g. Following mouse cytomegalovirus (MCMV) infection, Bhlhe40 was the most highly induced transcription factor in NK cells among the basic helix-loop-helix family. Bhlhe40 upregulation...
- Subject
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Basic Helix-Loop-Helix Transcription FactorsBinding sitesChromatin Immunoprecipitation SequencingInterferon-gammaInterleukin-12Interleukin-18Killer Cells, NaturalMouse CytomegalovirusSTAT4 Transcription Factor
- Access Rights
- Free to All
-
STAT4 promotes Bhlhe40 induction to drive protective IFN-g from natural killer cells during viral infection [RNA-Seq]
- Authors
- Lau, Colleen M.Kim, HyunuSun, Joseph C.
- Description
Summary from GEO: "NK cells represent a cellular component of the mammalian innate immune system, and mount rapid responses against viral infection, including the secretion of the potent anti-viral effector cytokine IFN-g. Following mouse cytomegalovirus (MCMV) infection, Bhlhe40 was the most highly induced transcription factor in NK cells among the basic helix-loop-helix family. Bhlhe40 upregulation...
- Subject
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Basic Helix-Loop-Helix Transcription FactorsInterferon-gammaInterleukin-12Interleukin-18Killer Cells, NaturalMouse CytomegalovirusRNA-SeqSTAT4 Transcription Factor
- Access Rights
- Free to All