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  • GtRNAdb: Genomic tRNA Database

    Description

    This genomic tRNA database contains tRNA gene predictions made by the program tRNAscan-SE 2.0 on complete or nearly complete genomes. Unless otherwise noted, all annotation is automated, and has not been inspected for agreement with published literature. Maintained by the Lowe Lab, Biomolecular Engineering, University of California Santa Cruz.

    Subject
    Genomics
    RNA, Transfer
    Access Rights
    Free to All
  • Cellular responses to long-term phosphate starvation of fission yeast: Maf1 determines fate choice between quiescence and death associated with aberrant tRNA biogenesis (mass spectrometry proteomics data)

    Authors
    Garg, Angad
    Shuman, Stewart H.
    Description

    Inorganic phosphate is an essential nutrient acquired by cells from their environment. Here we characterize the adaptative responses of fission yeast to chronic phosphate starvation, during which cells enter a state of quiescence, initially fully reversible upon replenishing phosphate after 2 days but resulting in gradual loss of viability during 4 weeks of starvation. Time-resolved analyses of changes...

    Subject
    Liquid Chromatography-Mass Spectrometry
    Maf Transcription Factors
    Phosphates/metabolism
    Protease Inhibitors
    Proteome
    RNA, Transfer
    Access Rights
    Free to All