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  • TARGET: Kidney, Rhabdoid Tumor (RT): A sub-study of National Cancer Institute (NCI) TARGET: Therapeutically Applicable Research to Generate Effective Treatments

    Authors
    Perlman, Elizabeth
    Description

    Study Description from dbGaP: "To further explore some more aggressive subtypes in pediatric cancer already under study in OCG, CGCI is partnering with TARGET initiative to support extensive sequencing analysis of three hard to treat childhood cancers: refractory to treatment cases of acute myeloid leukemia and two rare kidney tumors; clear cell sarcoma of the kidney and rhabdoid tumor (RT). Rhabdoid...

    Subject
    Kidney Neoplasms
    Leukemia, Myeloid, Acute
    Rhabdoid Tumor
    Sarcoma, Clear Cell
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  • Genomic Sequencing of Pediatric Rhabdoid Cancers

    Authors
    Roberts, Charles
    Golub, Todd
    Description

    Study Description from dbGaP: "In this study, we sequenced the exomes of 35 rhabdoid tumors, highly aggressive cancers of early childhood. This study is part of a larger effort to characterize pediatric cancers as part of the Slim Initiative for Genomic Medicine (SIGMA) project."

    Subject
    Rhabdoid Tumor
    Access Rights
    Application Required
  • Inhibition of MYC by the SMARCB1 tumor suppressor

    Authors
    Tansey, William
    Weissmiller, April
    Liu, Qi
    Wang, Jing
    Description

    Summary from the GEO: "We report that the protein encoded by the SMARCB1 gene, SNF5, is capable of inhibiting MYC binding in vitro and in a malignant rhabdoid tumor (MRT) cell line. By comparing the effects of reintroduction of SNF5 with genetic inhibition of MYC (OMOMYC) on multiple aspects of chromatin remodeling and transcription in MRT cells, we show that regulation of MYC binding by SNF5 is not...

    Subject
    Chromatin
    Chromatin Assembly and Disassembly
    Proto-Oncogene Proteins c-myc
    Rhabdoid Tumor
    SMARCB1 Protein
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    Free to All
  • Data S1. Human PGBD5 DNA transposase promotes site-specific oncogenic mutations in rhabdoid tumors

    Authors
    Henssen, Anton G.
    Koche, Richard Patrick
    Zhuang, Jiali
    Jiang, Eileen
    24 more author(s)...
    Description

    Description from Zenodo: "Supplementary data S1 for Henssen et al. Human PGBD5 DNA transposase promotes site-specific oncogenic mutations in rhabdoid tumors"

    Subject
    Chromatin Immunoprecipitation Sequencing
    DNA Transposable Elements
    Mutation
    Rhabdoid Tumor
    Access Rights
    Free to All