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Results Found: 5
  • Cancer associated SF3B1 hotspot mutations induce cryptic 3' splice site selection through use of a different branch point

    Authors
    Seiler, Michael
    Buonamici, Silvia
    Description

    Summary from GEO: "Recurrent mutations in the spliceosome are observed in several human cancers but their functional and therapeutic significance remain elusive. SF3B1, the most frequently mutated component of the spliceosome in cancer, is involved in the recognition of the branch point sequence (BPS) during selection of the 3’ splice site (ss) in RNA splicing. Here, we report that common and tumor-specific...

    Subject
    Mutation
    Nonsense Mediated mRNA Decay
    RNA Splicing
    Spliceosomes
    Access Rights
    Free to All
  • Physiologic expression of Sf3b1K700E causes impaired erythropoieses, aberrant splicing, and sensitivity to pharmacologic spliceosome modulation

    Authors
    Seiler, Michael
    Obeng, Esther A.
    Description

    Summary from GEO: "Over 80% of patients with the refractory anemia with ring sideroblasts subtype of myelodysplastic syndrome (MDS) have mutations in Splicing Factor 3B, Subunit 1 (SF3B1). We generated a conditional knock-in mouse model of the most common SF3B1 mutation, Sf3b1K700E. Sf3b1K700E mice develop macrocytic anemia due to a terminal erythroid maturation defect, erythroid dysplasia, and...

    Subject
    Anemia, Macrocytic
    Anemia, Refractory
    Erythropoiesis
    Gene Expression Profiling
    Myelodysplastic Syndromes
    Spliceosomes
    Access Rights
    Free to All
  • scRNAseq data of scrambled and siRNA-mediated knock-down of the minor spliceosome snRNA U6atac

    Description

    Description from EGA: "scRNAseq data of scrambled and siRNA-mediated knock-down (96h) of the minor spliceosome snRNA U6atac in androgen-sensitive LNCaP cells and in patient derived neuroendocrine organoids (PM154). Three replicates for each cell line."

    Subject
    Cell Line, Tumor
    Prostatic Neoplasms, Castration-Resistant
    Single-Cell Gene Expression Analysis
    Spliceosomes
    Access Rights
    Application Required
  • Bulk RNAseq data of scrambled and siRNA-mediated knock-down of the minor spliceosome snRNA U6atac

    Description

    Description from EGA: "Bulk RNAseq data of scrambled and siRNA-mediated knock-down of the minor spliceosome snRNA U6atac in androgen-sensitive LNCaP cells (L), androgen-insensitive C4-2 (C) and 22Rv1 (R) cells and in patient derived neuroendocrine organoids PM154 (P)."

    Subject
    Cell Line, Tumor
    Prostatic Neoplasms, Castration-Resistant
    RNA-Seq
    Spliceosomes
    Access Rights
    Application Required
  • Minor intron splicing is critical for survival of lethal prostate cancer (raw images)

    Authors
    Rubin, Mark A.
    Description

    Description from Mendeley Data: "Men with androgen receptor-negative castration-resistant prostate cancer (ARN CRPC) do not benefit from androgen receptor-directed therapies, face low survival rates, and have few alternative therapeutic options. Addressing this unmet clinical need requires new approaches to identify this more aggressive form of disease early on and to treat it effectively. A recent...

    Subject
    Introns/genetics
    Prostatic Neoplasms, Castration-Resistant
    Receptors, Androgen
    RNAi Therapeutics
    Spliceosomes
    Access Rights
    Free to All