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Results Found: 7
  • KMT2D suppresses Sonic Hedgehog-driven medulloblastoma progression and metastasis [ATAC-seq]

    Authors
    Sanghrajka, Reeti Mayur
    Koche, Richard Patrick
    Joyner, Alexandra L.
    Description

    Summary from GEO: "The major cause for treatment failure, morbidity and mortality amongst medulloblastoma patients is metastasis intracranially or along the spinal cord. The molecular mechanisms driving tumor metastasis in SHH-driven medulloblastoma (SHH-MB) patients remain largely unknown. In this study we used mouse models of SHH-MB to define a tumor suppressive role of KMT2D (MLL4), a gene frequently...

    Subject
    Chromatin Immunoprecipitation Sequencing
    Hedgehog Proteins
    Histone-Lysine N-Methyltransferase
    Medulloblastoma
    Neoplasm Metastasis
    Access Rights
    Free to All
  • KMT2D suppresses Sonic Hedgehog-driven medulloblastoma progression and metastasis [RNA-seq]

    Authors
    Sanghrajka, Reeti Mayur
    Koche, Richard Patrick
    Joyner, Alexandra L.
    Description

    Summary from GEO: "The major cause for treatment failure, morbidity and mortality amongst medulloblastoma patients is metastasis intracranially or along the spinal cord. The molecular mechanisms driving tumor metastasis in SHH-driven medulloblastoma (SHH-MB) patients remain largely unknown. In this study we used mouse models of SHH-MB to define a tumor suppressive role of KMT2D (MLL4), a gene frequently...

    Subject
    Hedgehog Proteins
    Histone-Lysine N-Methyltransferase
    Medulloblastoma
    Neoplasm Metastasis
    RNA-Seq
    Access Rights
    Free to All
  • Medulloblastoma (DKFZ, Nature 2017)

    Description

    Whole genome or whole exome sequencing of 491 previously untreated Medulloblastoma tumor/normal pairs. The clinical data consists of 491 samples from 491 patients, and includes mutation count, structural variants, patient demographics, and tumor subtypes. The data set also includes charts visualizing data summaries and a customizable plotting tool.

    Subject
    Exome Sequencing
    Genomics
    Medulloblastoma
    Mutation/genetics
    Whole Genome Sequencing
    Access Rights
    Free to All
  • Medulloblastoma (ICGC, Nature 2012)

    Description

    Comprehensive profiling of 125 matched tumor and germline medulloblastoma samples from 125 patients. The clinical data includes a KM plot, information about survival status, mutation counts, and genomic profiles . The data set also includes charts visualizing data summaries and a customizable plotting tool.

    Subject
    Gene Expression Profiling
    Genomics
    Medulloblastoma
    Mutation/genetics
    Access Rights
    Free to All
  • Medulloblastoma (Broad, Nature 2012)

    Description

    Whole exome sequencing of 92 primary medulloblastoma tumor/normal pairs. The clinical data includes mutation count, information about mutated genes, mutation counts, TMB, and genomic profiles . The data set also includes charts visualizing data summaries and a customizable plotting tool.

    Subject
    Exome Sequencing
    Genomics
    Medulloblastoma
    Mutation/genetics
    Access Rights
    Free to All
  • Medulloblastoma (PCGP, Nature 2012)

    Description

    Whole genome sequencing of 37 medulloblastoma tumors and their matched normals from the Pediatric Cancer Genome Project (PCGP), a joint project by St. Jude Children's Research Hospital and Washington University. The clinical data includes patient demographics, information about survival status, tumor cellularity dominant pathology reviews, and mutation counts. The data set also includes charts visualizing...

    Subject
    Genomics
    Medulloblastoma
    Mutation/genetics
    Whole Genome Sequencing
    Access Rights
    Free to All
  • Medulloblastoma (Sickkids, Nature 2016)

    Description

    Whole-genome sequencing of 46 recurrent medulloblastoma samples from 46 patients. The clinical data includes patient demographics, structural variants, mutation counts, and a KM plot. The data set also includes charts visualizing data summaries and a customizable plotting tool.

    Subject
    Genomics
    Medulloblastoma
    Mutation/genetics
    Whole Genome Sequencing
    Access Rights
    Free to All