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Squamous Cell Carcinoma of the Vulva: Whole exome sequencing of tumor/normal pairs from 15 vulvar squamous cell carcinomas
- Description
This dataset contains the summary data visualizations and clinical data from Whole exome sequencing of tumor/normal pairs from 15 vulvar squamous cell carcinomas from 15 patients. Clinical data includes: Mutation Count, Diagnosis Age, HPV Status, Invasion Depth (mm), Meat Target Coverage Normal, Mean Target Coverage Tumor, Sample Collection Source and Tumor Size. The plaintext components of the dataset...
- Subject
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Carcinoma, Squamous CellDNA Mutational AnalysisVulvar Neoplasms
- Access Rights
- Free to All
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The Angiosarcoma Project - Count Me In (Nature Medicine, 2020)
- Description
Dataset Summary Description: "The Angiosarcoma Project is an ongoing patient-driven initiative. This archived Angiosarcoma Project dataset was analyzed in the linked Nature Medicine 2020 manuscript, and is derived from 48 samples from 36 angiosarcoma patients. Angiosarcoma tumor specimens (FFPE) were subjected to whole-exome sequencing (along with matched germline whole-exome sequencing). In addition...
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AdenocarcinomaBasal Cell CarcinomaBreast NeoplasmsHemangiosarcomaHodgkin DiseaseLeukemia, Lymphocytic, Chronic, B-CellRectal NeoplasmsSkin NeoplasmsThyroid NeoplasmsUterine NeoplasmsVulvar Neoplasms
- Access Rights
- Free to All
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The Angiosarcoma Project (Provisional): an ongoing patient-driven initiative.
- Description
Dataset Summary Description: "This provisional dataset is currently derived from 83 samples, including tumor specimens (FFPE and cfDNA) from 62 angiosarcoma patients subjected to WES (along with matched germline WES). This study includes genomic data, patient-reported data (pre-pended as PRD), medical record data (MedR), and pathology report data (PATH). As these data were generated in a research...
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Basal Cell CarcinomaBreast NeoplasmsColorectal NeoplasmsHemangiosarcomaHodgkin DiseaseLeukemia, Lymphocytic, Chronic, B-CellProstatic NeoplasmsRectal NeoplasmsSkin NeoplasmsThyroid NeoplasmsUterine NeoplasmsVulvar Neoplasms
- Access Rights
- Free to All
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Illumina sequencing of vaginal epithelial cells from women using depot medroxyprogesterone acetate or non-hormonal contraception
- Authors
- Katherine, MackenzieHel, Zdenek
- Description
Summary from the GEO: "The use of the hormonal contraceptive DMPA has been associated with a moderate increase in sexually transmitted infections, including HIV-1. To better understand the biological mechanisms behind this phenomenon, we report here the use of mRNA-sequencing on the Illumina HiSeq2000 of vaginal epithelial cells from women using DMPA or controls. We found that women using DMPA demonstrate...
- Subject
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Data MiningSequence Analysis, RNA
- Access Rights
- Free to All