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Breast Invasive Carcinoma (TCGA, PanCancer Atlas) data
- Description
This dataset contains summary data visualizations and clinical data from a broad sampling of 1,084 breast invasive carcinomas from 1,084 patients. The data was gathered as part of the PanCancer Atlas initiative, which aims to answer big, overarching questions about cancer by examining the full set of tumors characterized in the robust TCGA dataset. The clinical data includes mutation count, information...
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Breast NeoplasmsCarcinoma, Ductal, BreastCarcinoma, LobularDNA Mutational Analysis
- Access Rights
- Free to All
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MSK-IMPACT Clinical Sequencing Cohort (MSKCC, Nat Med 2017): Targeted sequencing of 10,000 clinical cases using the MSK-IMPACT assay
- Description
This dataset contains summary data visualizations and clinical data from the targeted sequencing of 10,000 clinical cases using the MSK-IMPACT assay. The clinical data includes mutation count, information about mutated genes, tumor mutational burden calculations, tissue site from which the sample was derived, tumor purity among other relevant data points. The data set also includes copy-number segment...
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AdenocarcinomaAdenocarcinoma of LungAdenocarcinoma, MucinousBreast NeoplasmsCarcinoma, Ductal, BreastCarcinoma, HepatocellularCarcinoma, LobularCarcinoma, Non-Small-Cell LungCarcinoma, Renal CellCarcinoma, Squamous CellCarcinosarcomaCholangiocarcinomaColonic NeoplasmsColorectal NeoplasmsCystadenocarcinoma, SerousDNA Mutational AnalysisGallbladder NeoplasmsGlioblastomaLiposarcomaLung NeoplasmsLymphoma, FollicularMelanomaMesotheliomaNeoplasms, Squamous CellNeurofibromaOligodendrogliomaOsteosarcomaOvarian NeoplasmsPancreatic NeoplasmsProstatic NeoplasmsRectal NeoplasmsSarcomaSarcoma, SynovialSquamous Cell Carcinoma of Head and NeckStomach NeoplasmsThyroid Cancer, PapillaryUrinary Bladder NeoplasmsUterine NeoplasmsUveal Neoplasms
- Access Rights
- Free to All
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Breast Invasive Carcinoma (TCGA, Firehose Legacy)
- Description
TCGA Breast Invasive Carcinoma. Source data from GDAC Firehose. Previously known as TCGA Provisional. This dataset contains summary data visualizations and clinical data from a broad sampling of 1,108 carcinomas from 1,101 patients. The data was gathered as part of the Broad Institute of MIT and Harvard Firehose initiative, a cancer analysis pipeline. The clinical data includes mutation count, information...
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Breast NeoplasmsCarcinoma, Ductal, BreastCarcinoma, LobularDNA Mutational AnalysisSkin Neoplasms
- Access Rights
- Free to All
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Breast Cancer (MSK, Cancer Cell 2018): Targeted Sequencing of tumor/normal sample pairs from 1918 Breast cancers.
- Description
This dataset contains the summary data visualizations and clinical data from targeted sequencing of tumor/normal sample pairs from 1,918 Breast cancers from 1,756 patients. Clinical data includes: Cancer Type, Number of Samples Per Patient, Mutation Count, Fraction Genome Altered, Sample Type, Sex, Disease Free (Months), Disease Free Event, ER PCT Primary, ER Status of Sequenced Sample, ER Status...
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Breast Carcinoma In SituBreast NeoplasmsCarcinoma, Adenoid CysticCarcinoma, Ductal, BreastCarcinoma, Lobular
- Access Rights
- Free to All
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Data from: Clonal relatedness between lobular carcinoma in situ and synchronous malignant lesions
- Authors
- Andrade, Victor P.Ostrovnaya, IrinaSeshan, VenkatramanMorrogh, Mary6 more author(s)...
- Description
Summary from Dryad: "Abstract: INTRODUCTION: Lobular carcinoma in situ (LCIS) has been accepted as a marker of risk for the development of invasive breast cancer, yet modern models of breast carcinogenesis include LCIS as a precursor of low-grade carcinomas. We provide evidence favoring a clonal origin for LCIS and synchronous estrogen receptor-positive malignant lesions of the ductal and lobular...
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Biomarkers, TumorCarcinoma, Ductal, BreastCarcinoma, Lobular
- Access Rights
- Free to All
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Lobular Carcinomas In Situ Display Intra-Lesion Genetic Heterogeneity and Clonal Evolution in the Progression to Invasive Disease
- Authors
- King, Tari A.Reis-Filho, Jorge S.
- Description
Description from dbGaP: "This study comprises prospectively accrued, microdissected fresh frozen samples of multifocal lobular carcinoma in situ (LCIS), ductal carcinoma in situ (DCIS), invasive lobular carcinoma and invasive ductal carcinoma from patients undergoing prophylactic or therapeutic mastectomies after a diagnosis on LCIS diagnosed and managed at Memorial Sloan Kettering Cancer Center...
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Carcinoma, Ductal, BreastCarcinoma, LobularExome SequencingMastectomy
- Access Rights
- Application Required