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Cervical Squamous Cell Carcinoma (TCGA, PanCancer Atlas) data
- Description
This dataset contains summary data visualizations and clinical data from a broad sampling of 297 cervical squamous cell carcinomas from 297 patients. The data was gathered as part of the PanCancer Atlas initiative, which aims to answer big, overarching questions about cancer by examining the full set of tumors characterized in the robust TCGA dataset. The clinical data includes mutation count, information...
- Subject
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Carcinoma, Squamous CellDNA Mutational AnalysisUterine Neoplasms
- Access Rights
- Free to All
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Head and Neck Squamous Cell Carcinoma (TCGA, PanCancer Atlas)
- Description
This dataset contains summary data visualizations and clinical data from a broad sampling of 523 head and neck squamous sell carcinomas from 523 patients. The data was gathered as part of the PanCancer Atlas initiative, which aims to answer big, overarching questions about cancer by examining the full set of tumors characterized in the robust TCGA dataset. The clinical data includes mutation count,...
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Carcinoma, Squamous CellDNA Mutational AnalysisSquamous Cell Carcinoma of Head and Neck
- Access Rights
- Free to All
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Lung Squamous Cell Carcinoma (TCGA, PanCancer Atlas)
- Description
This dataset contains summary data visualizations and clinical data from a broad sampling of 487 lung squamous cell carcinomas from 487 patients. The data was gathered as part of the PanCancer Atlas initiative, which aims to answer big, overarching questions about cancer by examining the full set of tumors characterized in the robust TCGA dataset. The clinical data includes mutation count, information...
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Carcinoma, Non-Small-Cell LungCarcinoma, Squamous CellDNA Mutational Analysis
- Access Rights
- Free to All
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MSK-IMPACT Clinical Sequencing Cohort (MSKCC, Nat Med 2017): Targeted sequencing of 10,000 clinical cases using the MSK-IMPACT assay
- Description
This dataset contains summary data visualizations and clinical data from the targeted sequencing of 10,000 clinical cases using the MSK-IMPACT assay. The clinical data includes mutation count, information about mutated genes, tumor mutational burden calculations, tissue site from which the sample was derived, tumor purity among other relevant data points. The data set also includes copy-number segment...
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AdenocarcinomaAdenocarcinoma of LungAdenocarcinoma, MucinousBreast NeoplasmsCarcinoma, Ductal, BreastCarcinoma, HepatocellularCarcinoma, LobularCarcinoma, Non-Small-Cell LungCarcinoma, Renal CellCarcinoma, Squamous CellCarcinosarcomaCholangiocarcinomaColonic NeoplasmsColorectal NeoplasmsCystadenocarcinoma, SerousDNA Mutational AnalysisGallbladder NeoplasmsGlioblastomaLiposarcomaLung NeoplasmsLymphoma, FollicularMelanomaMesotheliomaNeoplasms, Squamous CellNeurofibromaOligodendrogliomaOsteosarcomaOvarian NeoplasmsPancreatic NeoplasmsProstatic NeoplasmsRectal NeoplasmsSarcomaSarcoma, SynovialSquamous Cell Carcinoma of Head and NeckStomach NeoplasmsThyroid Cancer, PapillaryUrinary Bladder NeoplasmsUterine NeoplasmsUveal Neoplasms
- Access Rights
- Free to All
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Esophageal Carcinoma (TCGA, Firehose Legacy)
- Description
This dataset contains summary data visualizations and clinical data from a broad sampling of 182 esophageal adenocarcinomas. TCGA Esophageal Carcinoma . Source data from GDAC Firehose. Previously known as TCGA Provisional. The data was gathered as part of the Broad Institute of MIT and Harvard Firehose initiative, a cancer analysis pipeline. his dataset contains summary data visualizations and clinical...
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AdenocarcinomaCarcinoma, Squamous CellDNA Mutational AnalysisEsophageal NeoplasmsNeoplasms, Squamous CellStomach Neoplasms
- Access Rights
- Free to All
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Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma
- Description
TCGA Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma. Source data from GDAC Firehose. Previously known as TCGA Provisional. This dataset contains summary data visualizations and clinical data from a broad sampling of 310 carcinomas from 308 patients. The data was gathered as part of the Broad Institute of MIT and Harvard Firehose initiative, a cancer analysis pipeline. The clinical...
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AdenocarcinomaCarcinoma, Squamous CellDNA Mutational AnalysisUterine Cervical Neoplasms
- Access Rights
- Free to All
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Head and Neck Squamous Cell Carcinoma (TCGA, Firehose Legacy)
- Description
TCGA Head and Neck Squamous Cell Carcinoma. Source data from GDAC Firehose. Previously known as TCGA Provisional. This dataset contains summary data visualizations and clinical data from a broad sampling of 530 carcinomas from 528 patients. The data was gathered as part of the Broad Institute of MIT and Harvard Firehose initiative, a cancer analysis pipeline. The clinical data includes mutation count,...
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Carcinoma, Squamous CellDNA Mutational AnalysisSquamous Cell Carcinoma of Head and Neck
- Access Rights
- Free to All
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Lung Squamous Cell Carcinoma (TCGA, Firehose Legacy)
- Description
TCGA Lung Squamous Cell Carcinoma. Source data from GDAC Firehose. Previously known as TCGA Provisional. This dataset contains summary data visualizations and clinical data from a broad sampling of 511 carcinomas from 511 patients. The data was gathered as part of the Broad Institute of MIT and Harvard Firehose initiative, a cancer analysis pipeline. The clinical data includes mutation count, information...
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Carcinoma, Non-Small-Cell LungCarcinoma, Squamous CellDNA Mutational AnalysisLung Neoplasms
- Access Rights
- Free to All
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Squamous Cell Carcinoma of the Vulva: Whole exome sequencing of tumor/normal pairs from 15 vulvar squamous cell carcinomas
- Description
This dataset contains the summary data visualizations and clinical data from Whole exome sequencing of tumor/normal pairs from 15 vulvar squamous cell carcinomas from 15 patients. Clinical data includes: Mutation Count, Diagnosis Age, HPV Status, Invasion Depth (mm), Meat Target Coverage Normal, Mean Target Coverage Tumor, Sample Collection Source and Tumor Size. The plaintext components of the dataset...
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Carcinoma, Squamous CellDNA Mutational AnalysisVulvar Neoplasms
- Access Rights
- Free to All
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Mixed cfDNA (MSKCC, 2020): IMPACT sequencing of 229 cell-free DNA (cfDNA) and associated tumor samples with matched normal
- Description
This dataset contains the summary data visualizations and clinical data of IMPACT sequencing of 229 cell-free DNA (cfDNA) and associated tumor samples with matched normal from 118 patients. Clinical data includes: Cancer Type, Number of Samples Per Patient, Mutation Count, Fraction Genome Altered, Sex, Primary/Metastasis Sample Type, Collaboration Id, Gene Panel, Oncotree Code, Tumor/cfDNA Sample...
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AdenocarcinomaAdenocarcinoma of LungBreast NeoplasmsCarcinoma, Ductal, BreastCarcinoma, NeuroendocrineCarcinoma, Renal CellCarcinoma, Squamous CellCell-Free Nucleic AcidsChoriocarcinomaEndodermal Sinus TumorMelanomaNeoplasms, Germ Cell and EmbryonalNeoplasms, Squamous CellNeuroendocrine TumorsProstatic NeoplasmsSeminomaSmall Cell Lung CarcinomaUrinary Bladder Neoplasms
- Access Rights
- Free to All