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  • Epigenetic control of innate and adaptive immune memory [ATAC-Seq]

    Alternate Title(s)
    Regulation of natural killer cells during MCMV infection
    Authors
    Lau, Colleen M.
    Sun, Joseph C.
    Description

    Clonal expansion and immunological memory are hallmark features of the mammalian adaptive immune response and essential for prolonged host control of pathogens. Recent work demonstrated that natural killer (NK) cells of the innate immune system also exhibit these adaptive traits during infection. Here we demonstrate that differentiating and ‘memory’ NK cells possess distinct chromatin accessibility...

    Subject
    Epigenetics
    Killer Cells, Natural
    T-Lymphocytes, Cytotoxic
    Access Rights
    Free to All
  • Epigenetic evolution and lineage histories of chronic lymphocytic leukemia

    Authors
    Gaiti, Federico
    Chaligne, Ronan
    Gu, Hongcang
    Wu, Catherine J.
    2 more author(s)...
    Description

    Summary from the GEO: "Genetic and epigenetic intra-tumoral heterogeneity cooperate to shape the evolutionary course of cancer. In addition to genetic mutations, chronic lymphocytic leukemia (CLL) undergoes diversification through stochastic DNA methylation changes – epimutations. To measure the epimutation rate at single-cell resolution, we applied multiplexed reduced representation bisulfite sequencing...

    Subject
    B-Lymphocytes
    Epigenetics
    Leukemia, Lymphocytic, Chronic, B-Cell
    Access Rights
    Free to All
  • Corrupted coordination of epigenetic modifications leads to diverging chromatin states and transcriptional heterogeneity in chronic lymphocytic leukemia

    Authors
    Pastore, Alessandro
    Gaiti, Federico
    Lu , Sydney X.
    Brand, Ryan M.
    19 more author(s)...
    Description

    Summary from the GEO: "Cancer evolution is fueled by genetic and epigenetic diversity, and intra-tumoral heterogeneity in DNA methylation has been shown to co-operate with genetic heterogeneity to empower evolutionary capacity of cancers such as chronic lymphocytic leukemia. Here, we show that epigenetic diversification leads to decreased coordination across layers of epigenetic information, likely...

    Subject
    DNA Methylation
    Epigenetics
    Leukemia, Lymphocytic, Chronic, B-Cell
    Access Rights
    Free to All
  • Chemosensitive Relapse in Small Cell Lung Cancer Patient-Derived Xenografts

    Authors
    Poirier, John T.
    Description

    Description from dbGaP: "Genetic and epigenetic analysis of patient-derived xenograft models of acquired chemoresistance in small cell lung cancer."

    Subject
    Drug Resistance, Neoplasm
    Epigenetics
    Neoplasms/genetics
    Small Cell Lung Carcinoma
    Access Rights
    Application Required