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Upper Tract Urothelial Cancer (MSK, Eur Urol 2015): Next-generation sequencing (MSK-IMPACT) on all protein-coding exons of 300 cancer associated genes of 85 Upper Tract Urothelial Carcinoma tumor samples and paired normals.
- Description
This dataset contains summary data visualizations and clinical data from a broad of 85 samples of upper tract urothelial carcinoma tumors from 83 patients. The data was gathered utilizing the MSK-IMPACT targeted sequencing test. The clinical data includes mutation count, information about mutated genes, patient demographics, disease status, Adjuvant Chemotherapy, American Joint Committee on Cancer...
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DNA Mutational AnalysisKidney NeoplasmsUreteral NeoplasmsUrinary Bladder Neoplasms
- Access Rights
- Free to All
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Upper Tract Urothelial Carcinoma PDX (MSK, 2019): MSK-IMPACT sequencing of 34 upper tract urothelial patients and the matching PDX or PDC generated from 17 patient tumors.
- Description
This dataset contains summary data visualizations and clinical data from a broad sampling of upper tract unothelial carcinoma tumors. The data was gathered utilizing the MSK-IMPACT targeted sequencing test. The clinical data includes tumor type (based on the opensource OncoTree ontology developed at MSK), mutation count, information about mutated genes, patient demographics, American Joint Committee...
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DNA Mutational AnalysisKidney NeoplasmsUreteral NeoplasmsUrinary Bladder Neoplasms
- Access Rights
- Free to All
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Kidney Renal Clear Cell Carcinoma
- Description
TCGA Kidney Renal Clear Cell Carcinoma. Source data from GDAC Firehose. Previously known as TCGA Provisional. his dataset contains summary data visualizations and clinical data from a broad sampling of 538 carcinomas from 537 patients. The data was gathered as part of the Broad Institute of MIT and Harvard Firehose initiative, a cancer analysis pipeline. The clinical data includes mutation count,...
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Carcinoma, Renal CellDNA MethylationKidney Neoplasms
- Access Rights
- Free to All
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Kidney Chromophobe (TCGA, Firehose Legacy)
- Description
TCGA Kidney Chromophobe. Source data from GDAC Firehose. Previously known as TCGA Provisional. This dataset contains summary data visualizations and clinical data from a broad sampling of 113 carcinomas from 113 patients. he data was gathered as part of the Broad Institute of MIT and Harvard Firehose initiative, a cancer analysis pipeline. The clinical data includes mutation count, information about...
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Carcinoma, Renal CellDNA Mutational AnalysisKidney Neoplasms
- Access Rights
- Free to All
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TARGET: Kidney, Rhabdoid Tumor (RT): A sub-study of National Cancer Institute (NCI) TARGET: Therapeutically Applicable Research to Generate Effective Treatments
- Authors
- Perlman, Elizabeth
- Description
Study Description from dbGaP: "To further explore some more aggressive subtypes in pediatric cancer already under study in OCG, CGCI is partnering with TARGET initiative to support extensive sequencing analysis of three hard to treat childhood cancers: refractory to treatment cases of acute myeloid leukemia and two rare kidney tumors; clear cell sarcoma of the kidney and rhabdoid tumor (RT). Rhabdoid...
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Kidney NeoplasmsLeukemia, Myeloid, AcuteRhabdoid TumorSarcoma, Clear Cell
- Access Rights
- Application Required
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Comprehensive Molecular Characterization Identifies Distinct Genomic and Immune Hallmarks of Renal Medullary Carcinoma
- Description
Summary from BioProject: "Renal medullary carcinoma (RMC) is a highly lethal malignancy that mainly afflicts young individuals of African descent and is resistant to all targeted agents used to treat other renal cell carcinomas. Comprehensive genomic and transcriptomic profiling of untreated primary RMC tissues was performed to elucidate the molecular landscape of these tumors. We found that RMC was...
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Carcinoma, MedullaryCarcinoma, Renal CellKidney Neoplasms
- Access Rights
- Free to All
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Upper Tract Urothelial Carcinoma (MSK, Nat Commun 2020): Targeted Sequencing of 119 upper tract urothelial carcinoma tumor/normal pairs.
- Description
This dataset contains the summary data visualizations and clinical data from targeted sequencing of 119 upper tract urothelial carcinoma tumor/normal pairs from 119 patients. Clinical data includes: Mutation Count, Fraction Genome Altered, Sex, Race Category, Age At Surgery, AJCC Tumor Stage Code, Neoplasm Histologic Grade. The plaintext components of the dataset can be downloaded as a tar file. The...
- Subject
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Kidney NeoplasmsUreteral NeoplasmsUrinary Bladder Neoplasms
- Access Rights
- Free to All