-
SMYD5 regulates H4K20me3-marked heterochromatin to safeguard ES cell self-renewal and prevent spurious differentiation [ChIP-Seq]
- Authors
- Kidder, Benjamin L.Zhao, Keji
- Description
Summary from the GEO:"Epigenetic regulation of chromatin states is thought to control the self-renewal and differentiation of embryonic stem (ES) cells. However, the roles of repressive histone modifications such as trimethylated histone lysine 20 (H4K20me3) in pluripotency and development are largely unknown. Here, we show that the histone lysine methyltransferase SMYD5 mediates H4K20me3 at heterochromatin...
- Subject
-
Chromatin Immunoprecipitation SequencingDNA MethylationGene SilencingHistone CodeHistone-Lysine N-MethyltransferaseMethyltransferasesRNA InterferenceTumor Suppressor Proteins
- Access Rights
- Free to All
-
SMYD5 regulates H4K20me3-marked heterochromatin to safeguard ES cell self-renewal and prevent spurious differentiation [RNA-Seq]
- Authors
- Kidder, Benjamin L.Zhao, Keji
- Description
Summary from the GEO: "Epigenetic regulation of chromatin states is thought to control the self-renewal and differentiation of embryonic stem (ES) cells. However, the roles of repressive histone modifications such as trimethylated histone lysine 20 (H4K20me3) in pluripotency and development are largely unknown. Here, we show that the histone lysine methyltransferase SMYD5 mediates H4K20me3 at heterochromatin...
- Subject
-
Chromatin Immunoprecipitation SequencingDNA MethylationGene SilencingHistone CodeHistone-Lysine N-MethyltransferaseMethyltransferasesRNA InterferenceTumor Suppressor Proteins
- Access Rights
- Free to All
-
SMYD5 regulates H4K20me3-marked heterochromatin to safeguard ES cell self-renewal and prevent spurious differentiation
- Authors
- Kidder, Benjamin L.
- Description
Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Summary: This SuperSeries is composed of the SubSeries GSE94033 and GSE94085. Article summary that correlates to the GEO: "Epigenetic regulation of chromatin states is thought to control the self-renewal and differentiation of embryonic stem (ES) cells. However, the roles of repressive...
- Subject
-
Chromatin Immunoprecipitation SequencingDNA MethylationGene SilencingHistone CodeHistone-Lysine N-MethyltransferaseMethyltransferasesRNA InterferenceTumor Suppressor Proteins
- Access Rights
- Free to All
-
Regulatory logic of endogenous RNAi in silencing de novo genomic conflicts
- Authors
- Vedanayagam, JeffreyLin, Ching-JungPapareddy, RanjithNodine, Michael3 more author(s)...
- Description
Summary from GEO: "Although the biological utilities of endogenous RNAi (endo-RNAi) have been largely elusive, recent studies reveal its critical role in the non-model fruitfly Drosophila simulans to suppress selfish genes, whose unchecked activities can severely impair spermatogenesis. In particular, hairpin RNA (hpRNA) loci generate endo-siRNAs that suppress evolutionary novel, X-linked, meiotic...
- Subject
-
Gene ExpressionRNA InterferenceRNA-SeqRNA, Small InterferingSpermatogenesis
- Access Rights
- Free to All
-
Supplemental table S1 from Histone Acetyltransferase Activity of MOF Is Required for MLL-AF9 Leukemogenesis
- Authors
- Valerio, Daria G.Xu, HaimingChen, Chun-WeiHoshii, Takayuki11 more author(s)...
- Description
Description from Figshare: "RNAi screen data summary"
- Subject
-
Histone AcetyltransferasesLeukemiaRNA Interference
- Access Rights
- Free to All
-
A nuclear RNA export factor variant licenses piRNA-guided heterochromatin formation
- Authors
- Imre, RichardBrennecke, Julius Fabian
- Description
Description from PRIDE: "Small RNA silencing pathways protect genome integrity in part through establishing heterochromatin at transposon loci. In animals, this process requires piRNA-guided targeting of nuclear PIWI proteins to nascent transcripts. The molecular events contributing to heterochromatin formation upon PIWI binding to nascent RNA, a transient molecule at chromatin, are unknown. Here,...
- Subject
-
Binding sitesHeterochromatinProtein ConformationRNA InterferenceRNA-Binding ProteinsRNA, Small Interfering
- Access Rights
- Free to All
-
The nascent RNA binding complex SFiNX licenses piRNA-guided heterochromatin formation
- Authors
- Batki, JuliaSchnabl, JakobWang, JunchengHandler, Dominik9 more author(s)...
- Description
Summary from GEO: "The PIWI-interacting RNA (piRNA) pathway protects animal genome integrity in part through establishing repressive heterochromatin at transposon loci. Silencing requires piRNA- guided targeting of nuclear PIWI proteins to nascent transposon transcripts, yet the subsequent molecular events are not understood. Here, we identify SFiNX (Silencing Factor interacting Nuclear eXport variant),...
- Subject
-
GenomicsHeterochromatinRNA InterferenceRNA-Binding ProteinsRNA-Seq
- Access Rights
- Free to All