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Results Found: 8
  • Pull-down of Mlh3-Flag from yeast meiotic cells and analysis of pulled-down partner proteins

    Authors
    Loew, Damarys
    Sabatet, Valentin
    Description

    Description from Proteome Xchange: "Mlh3 internally tagged with Flag was pulled down from synchronous meiotic cells at t = 4 h in meiosis, in order to identify its interacting partners involved in meiotic crossover formation" Sample Processing Protocol from PRIDE: "2.1010 cells of VBD1674 strain at 4 h in meiosis were harvested, washed two times with ice-cold TNG buffer (50 mM Tris/HCl pH 8; 150...

    Subject
    Meiosis
    MutL Proteins
    Proteome
    Recombination, Genetic
    Access Rights
    Free to All
  • Mechanism of in vivo activation of the MutLgamma-Exo1 complex for meiotic crossover formation

    Authors
    Borde, Valerie
    Description

    Summary from the GEO: "Programmed DNA double-strand breaks (DSBs) initiate meiotic recombination and their subsequent repair culminates in crossover (CO) formation. COs result from the asymmetric cleavage of double-Holliday junction (dHJ) intermediates, that requires the MutLγ complex together with a non-catalytic function of Exo1, an activity essential for fertility but at risk of generating unwanted...

    Subject
    DNA Breaks, Double-Stranded
    Meiosis
    MutL Proteins
    Protein Binding
    Recombination, Genetic
    Access Rights
    Free to All
  • Mechanism of in vivo activation of the MutL-Exo1 complex for meiotic crossover formation

    Authors
    Sanchez, Aurore
    Mu, Xiaojing
    Borde, Valerie
    Keeney, Scott
    Description

    Summary from the GEO: "Programmed DNA double-strand breaks (DSBs) initiate meiotic recombination and their subsequent repair culminates in crossover (CO) formation. COs result from the asymmetric cleavage of double-Holliday junction (dHJ) intermediates, that requires the MutLγ endonuclease and a non-catalytic function of Exo1, an activity essential for fertility but at risk of generating unwanted...

    Subject
    DNA Breaks, Double-Stranded
    Meiosis
    MutL Proteins
    Protein Binding
    Recombination, Genetic
    Access Rights
    Free to All
  • Pull-down of Exo1-TAP from yeast meiotic cells and analysis of phosphorylated residues

    Authors
    Loew, Damarys
    Sabatet, Valentin
    Description

    Description from the ProteomeXchange: "Exo1 tagged with the TAP sequence was pulled down from synchronous ndt80∆ meiotic cells after induction of the CDC5 kinase at t = 8 h 15 in meiosis (1 h 15 after CDC5 induction), in order to identify its phosphorylated residues" PRIDE Sample Processing Protocol: "2.1010 cells of VBD2070 strain were harvested after 8 h 15 min in sporulation medium and processed...

    Subject
    Meiosis
    MutL Proteins
    Proteome
    Recombination, Genetic
    Access Rights
    Free to All
  • Data from: Genomic DNA transposition induced by human PGBD5

    Authors
    Henssen, Anton G.
    Henaff, Elizabeth
    Jiang, Eileen
    Eisenberg, Amy R.
    9 more author(s)...
    Description

    Summary from Dryad: "Abstract: Transposons are mobile genetic elements that are found in nearly all organisms, including humans. Mobilization of DNA transposons by transposase enzymes can cause genomic rearrangements, but our knowledge of human genes derived from transposases is limited. In this study, we find that the protein encoded by human PGBD5, the most evolutionarily conserved transposable...

    Subject
    Recombination, Genetic
    Transposases
    Access Rights
    Free to All
  • De novo deletions and duplications at recombination hotspots in mouse germlines

    Authors
    Lukaszewicz, Agnieszka
    Keeney, Scott
    Jasin, Maria
    Description

    Summary from GEO: "Numerous DNA double-strand breaks (DSBs) arise during meiosis to initiate homologous recombination. These DSBs are usually repaired faithfully, but here we uncover a new type of mutational event in which deletions form via joining of ends from two closely-spaced DSBs (double cuts) within a single hotspot or at adjacent hotspots on the same or different chromatids. Deletions occur...

    Subject
    Ataxia Telangiectasia Mutated Proteins
    DNA Breaks, Double-Stranded
    Meiosis
    Mutagenesis, Insertional
    Recombination, Genetic
    Access Rights
    Free to All
  • Spo11-oligo mapping of double-strand breaks in spo11 mutants

    Authors
    Tischfield, Sam E.
    Keeney, Scott
    Description

    Summary from GEO: "The Spo11-generated double-strand breaks (DSBs) that initiate meiotic recombination are non-randomly distributed across the genome. Here, we use Spo11-oligonucleotide complexes to map the distribution of meiotic DSBs in a spo11 mutant strain of Saccharomyces cerevisiae." Overall design from GEO: "4 samples total: two biological replicate Spo11-oligo maps of S. cerevisiae SK1...

    Subject
    DNA Breaks, Double-Stranded
    Meiosis
    Recombination, Genetic
    Sequence Analysis, DNA
    Access Rights
    Free to All
  • Meiotic double-strand break mapping in spo11 mutants by S1Seq

    Authors
    Tischfield, Sam E.
    Mimitou, Eleni P.
    Keeney, Scott
    Description

    Summary from GEO: "The Spo11-generated double-strand breaks (DSBs) that initiate meiotic recombination are non-randomly distributed across the genome. Here, we use S1Seq mapping to map the distribution of meiotic DSBs in spo11 mutant strains of Saccharomyces cerevisiae." Overall design from GEO: "4 samples total: two biological replicate Spo11-oligo maps of S. cerevisiae spo11-F260A and wildtype."

    Subject
    DNA Breaks, Double-Stranded
    Meiosis
    Recombination, Genetic
    Sequence Analysis, DNA
    Access Rights
    Free to All