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Stomach Adenocarcinoma (TCGA, PanCancer Atlas)
- Description
This dataset contains summary data visualizations and clinical data from a broad sampling of 440 stomach adenocarcinomas from 440 patients. The data was gathered as part of the PanCancer Atlas initiative, which aims to answer big, overarching questions about cancer by examining the full set of tumors characterized in the robust TCGA dataset. The clinical data includes mutation count, information about...
- Subject
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AdenocarcinomaDNA Mutational AnalysisEsophageal NeoplasmsStomach Neoplasms
- Access Rights
- Free to All
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MSK-IMPACT Clinical Sequencing Cohort (MSKCC, Nat Med 2017): Targeted sequencing of 10,000 clinical cases using the MSK-IMPACT assay
- Description
This dataset contains summary data visualizations and clinical data from the targeted sequencing of 10,000 clinical cases using the MSK-IMPACT assay. The clinical data includes mutation count, information about mutated genes, tumor mutational burden calculations, tissue site from which the sample was derived, tumor purity among other relevant data points. The data set also includes copy-number segment...
- Subject
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AdenocarcinomaAdenocarcinoma of LungAdenocarcinoma, MucinousBreast NeoplasmsCarcinoma, Ductal, BreastCarcinoma, HepatocellularCarcinoma, LobularCarcinoma, Non-Small-Cell LungCarcinoma, Renal CellCarcinoma, Squamous CellCarcinosarcomaCholangiocarcinomaColonic NeoplasmsColorectal NeoplasmsCystadenocarcinoma, SerousDNA Mutational AnalysisGallbladder NeoplasmsGlioblastomaLiposarcomaLung NeoplasmsLymphoma, FollicularMelanomaMesotheliomaNeoplasms, Squamous CellNeurofibromaOligodendrogliomaOsteosarcomaOvarian NeoplasmsPancreatic NeoplasmsProstatic NeoplasmsRectal NeoplasmsSarcomaSarcoma, SynovialSquamous Cell Carcinoma of Head and NeckStomach NeoplasmsThyroid Cancer, PapillaryUrinary Bladder NeoplasmsUterine NeoplasmsUveal Neoplasms
- Access Rights
- Free to All
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Esophageal Carcinoma (TCGA, Firehose Legacy)
- Description
This dataset contains summary data visualizations and clinical data from a broad sampling of 182 esophageal adenocarcinomas. TCGA Esophageal Carcinoma . Source data from GDAC Firehose. Previously known as TCGA Provisional. The data was gathered as part of the Broad Institute of MIT and Harvard Firehose initiative, a cancer analysis pipeline. his dataset contains summary data visualizations and clinical...
- Subject
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AdenocarcinomaCarcinoma, Squamous CellDNA Mutational AnalysisEsophageal NeoplasmsNeoplasms, Squamous CellStomach Neoplasms
- Access Rights
- Free to All
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Stomach Adenocarcinoma (TCGA, Firehose Legacy)
- Description
TCGA Stomach Adenocarcinoma. Source data from GDAC Firehose. Previously known as TCGA Provisional. This dataset contains summary data visualizations and clinical data from a broad sampling of 478 carcinomas from 478 patients. The data was gathered as part of the Broad Institute of MIT and Harvard Firehose initiative, a cancer analysis pipeline. The clinical data includes mutation count, information...
- Subject
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AdenocarcinomaAdenocarcinoma, PapillaryDNA Mutational AnalysisStomach Neoplasms
- Access Rights
- Free to All
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Esophageal/Stomach Cancer (MSK, 2020): Targeted sequencing of 487 Esophageal/stomach cancer tumor-normal pairs via MSK-IMPACT
- Description
This dataset contains the summary data visualizations and clinical data from targeted sequencing of 487 Esophageal/stomach cancer tumor-normal pairs. Clinical data includes: Cancer Type, Mutation Count, Fraction Genome Altered, Overall Survival Status, Sex, Primary/Metastasis Sample Type, Age at Sampling, Cohort, cStage Category, Fraction of Genome Altered (FACETs), Impact TMB Score, MSI Score pStage...
- Subject
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AdenocarcinomaEsophageal NeoplasmsStomach Neoplasms
- Access Rights
- Free to All
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Metastatic Esophagogastric Cancer (MSKCC, Cancer Discovery 2017): Targeted sequencing of 341 samples from 305 metastatic esophagogastric cancer patients
- Description
This dataset contains the summary data visualizations and clinical data from targeted sequencing of 341 samples from 305 metastatic esophagogastric cancer patients. Clinical data includes: Cancer Type, Number of Samples Per Patient, Mutation Count, Fraction Genome Altered, Metastasis/Primary Sample Type, Sex, Race Category, Age at Diagnosis, Biopsy Obtained at MSK or OSH, Clinical Trial 1L, Clinical...
- Subject
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AdenocarcinomaEsophageal NeoplasmsStomach Neoplasms
- Access Rights
- Free to All
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Somatic mouse models of gastric cancer reveal genotype-specific features of metastatic disease
- Authors
- Leibold, JosefAmor, CorinaTsanov, Kaloyan M.Ho, Yu-jui9 more author(s)...
- Description
Summary from GEO: "Metastatic gastric carcinoma is a highly lethal cancer that responds poorly to conventional and molecularly targeted therapies. Despite its clinical relevance, the mechanisms underlying the behavior and therapeutic response of this disease are poorly understood owing, in part, to a paucity of tractable models that faithfully recapitulate different subtypes of the human disease....
- Subject
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CarcinogenesisGastric MucosaModels, AnimalRNA-SeqStomach Neoplasms
- Access Rights
- Free to All