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Results Found: 7
  • Stomach Adenocarcinoma (TCGA, PanCancer Atlas)

    Description

    This dataset contains summary data visualizations and clinical data from a broad sampling of 440 stomach adenocarcinomas from 440 patients. The data was gathered as part of the PanCancer Atlas initiative, which aims to answer big, overarching questions about cancer by examining the full set of tumors characterized in the robust TCGA dataset. The clinical data includes mutation count, information about...

    Subject
    Adenocarcinoma
    DNA Mutational Analysis
    Esophageal Neoplasms
    Stomach Neoplasms
    Access Rights
    Free to All
  • MSK-IMPACT Clinical Sequencing Cohort (MSKCC, Nat Med 2017): Targeted sequencing of 10,000 clinical cases using the MSK-IMPACT assay

    Description

    This dataset contains summary data visualizations and clinical data from the targeted sequencing of 10,000 clinical cases using the MSK-IMPACT assay. The clinical data includes mutation count, information about mutated genes, tumor mutational burden calculations, tissue site from which the sample was derived, tumor purity among other relevant data points. The data set also includes copy-number segment...

    Subject
    Adenocarcinoma
    Adenocarcinoma of Lung
    Adenocarcinoma, Mucinous
    Breast Neoplasms
    Carcinoma, Ductal, Breast
    Carcinoma, Hepatocellular
    Carcinoma, Lobular
    Carcinoma, Non-Small-Cell Lung
    Carcinoma, Renal Cell
    Carcinoma, Squamous Cell
    Carcinosarcoma
    Cholangiocarcinoma
    Colonic Neoplasms
    Colorectal Neoplasms
    Cystadenocarcinoma, Serous
    DNA Mutational Analysis
    Gallbladder Neoplasms
    Glioblastoma
    Liposarcoma
    Lung Neoplasms
    Lymphoma, Follicular
    Melanoma
    Mesothelioma
    Neoplasms, Squamous Cell
    Neurofibroma
    Oligodendroglioma
    Osteosarcoma
    Ovarian Neoplasms
    Pancreatic Neoplasms
    Prostatic Neoplasms
    Rectal Neoplasms
    Sarcoma
    Sarcoma, Synovial
    Squamous Cell Carcinoma of Head and Neck
    Stomach Neoplasms
    Thyroid Cancer, Papillary
    Urinary Bladder Neoplasms
    Uterine Neoplasms
    Uveal Neoplasms
    Access Rights
    Free to All
  • Esophageal Carcinoma (TCGA, Firehose Legacy)

    Description

    This dataset contains summary data visualizations and clinical data from a broad sampling of 182 esophageal adenocarcinomas. TCGA Esophageal Carcinoma . Source data from GDAC Firehose. Previously known as TCGA Provisional. The data was gathered as part of the Broad Institute of MIT and Harvard Firehose initiative, a cancer analysis pipeline. his dataset contains summary data visualizations and clinical...

    Subject
    Adenocarcinoma
    Carcinoma, Squamous Cell
    DNA Mutational Analysis
    Esophageal Neoplasms
    Neoplasms, Squamous Cell
    Stomach Neoplasms
    Access Rights
    Free to All
  • Stomach Adenocarcinoma (TCGA, Firehose Legacy)

    Description

    TCGA Stomach Adenocarcinoma. Source data from GDAC Firehose. Previously known as TCGA Provisional. This dataset contains summary data visualizations and clinical data from a broad sampling of 478 carcinomas from 478 patients. The data was gathered as part of the Broad Institute of MIT and Harvard Firehose initiative, a cancer analysis pipeline. The clinical data includes mutation count, information...

    Subject
    Adenocarcinoma
    Adenocarcinoma, Papillary
    DNA Mutational Analysis
    Stomach Neoplasms
    Access Rights
    Free to All
  • Esophageal/Stomach Cancer (MSK, 2020): Targeted sequencing of 487 Esophageal/stomach cancer tumor-normal pairs via MSK-IMPACT

    Description

    This dataset contains the summary data visualizations and clinical data from targeted sequencing of 487 Esophageal/stomach cancer tumor-normal pairs. Clinical data includes: Cancer Type, Mutation Count, Fraction Genome Altered, Overall Survival Status, Sex, Primary/Metastasis Sample Type, Age at Sampling, Cohort, cStage Category, Fraction of Genome Altered (FACETs), Impact TMB Score, MSI Score pStage...

    Subject
    Adenocarcinoma
    Esophageal Neoplasms
    Stomach Neoplasms
    Access Rights
    Free to All
  • Metastatic Esophagogastric Cancer (MSKCC, Cancer Discovery 2017): Targeted sequencing of 341 samples from 305 metastatic esophagogastric cancer patients

    Description

    This dataset contains the summary data visualizations and clinical data from targeted sequencing of 341 samples from 305 metastatic esophagogastric cancer patients. Clinical data includes: Cancer Type, Number of Samples Per Patient, Mutation Count, Fraction Genome Altered, Metastasis/Primary Sample Type, Sex, Race Category, Age at Diagnosis, Biopsy Obtained at MSK or OSH, Clinical Trial 1L, Clinical...

    Subject
    Adenocarcinoma
    Esophageal Neoplasms
    Stomach Neoplasms
    Access Rights
    Free to All
  • Somatic mouse models of gastric cancer reveal genotype-specific features of metastatic disease

    Authors
    Leibold, Josef
    Amor, Corina
    Tsanov, Kaloyan M.
    Ho, Yu-jui
    9 more author(s)...
    Description

    Summary from GEO: "Metastatic gastric carcinoma is a highly lethal cancer that responds poorly to conventional and molecularly targeted therapies. Despite its clinical relevance, the mechanisms underlying the behavior and therapeutic response of this disease are poorly understood owing, in part, to a paucity of tractable models that faithfully recapitulate different subtypes of the human disease....

    Subject
    Carcinogenesis
    Gastric Mucosa
    Models, Animal
    RNA-Seq
    Stomach Neoplasms
    Access Rights
    Free to All